Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0278 |
Symbol | |
ID | 5412231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 261042 |
End bp | 263363 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640867494 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001403443 |
Protein GI | 154149825 |
COG category | [R] General function prediction only |
COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.235091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGTTG CTGATGTGGT GCACTTCATC AGCACCAATC CCGTGTACCG CAGCCGGGTC GCCTGCCACA ACGTTACGGA CCCGGAACCG GCAGCGTACG GGAAGCTCGA CCGGCCTCTT CCCGATGCGC TTGATGCATA CCTGGCCCAT GCCGGTATCC GGCTCTTCAC CCACCAGTGC GAGGCAGTCA ACCTCCTCCG CGAACACAGG AACGTGATCA TCACAACCCC GACGGCGAGT GGGAAGACCC TTGCATTCAA CCTCCCGGTC TTTGAGCGTA TGTCAGCAGA CCCGGATGCC CGGGCGCTCT ACCTCTACCC CACAAAAGCG CTTGCAAACG ACCAGCTCGC AACGCTCCTT GCAATGGAAA AGTTCACCGG TATCCCGGTA AAATCCGCGA TCTACGATGG GGATACCCCG CAGTCGAAAA GGTCCGCGAT CCGGGAGCAC GCCCGGATCG TGATCTCGAA CCCGTACGAA CTCCACCAGG TCCTCTCCTG GCACAGTAAA TGGAGCCCGT TTTTCTCAAA CCTCCAGTAC GTTGTGCTGG ACGAAGCCCA CCGGTACCGG GGGATCTTCG GCTCGCAAAT CGCGCTTCTC GTTCGAAGAC TCCGCCGGCT TGCCCGGTAT TATGGCACCG ATCCACAGTT CGTGCTTTCG AGTGCAACGC TCGCAAACCC GGAGGAATTT GCAAAAAGAC TTGCTGGCCT GCCCTTCGTG CAGGTGGAAA GCGATGGTTC CCCGCGGGGC AGACGACACT TTGTCCTCTA TAACCCATTT TTCGATGGCG TTGGCGAGCG CTCCGCCCAT CAGGAATCAA AGGATCTTCT CGTTTCCTGT GTCAAAGGCG ACCTCCAGGC GCTCTGCTTT GCCGGTTCCC GAAAGATCGC GGAGCTCGTT GCGCTCTGGG CAAAAGAGGA CCTCCGGCGC AATTCCCCCC GGCTCGCAGA AAGTGTCCTT GCCTACCGGG CCGGCTACCT CCCCGAAGAG CGCCGCTGGA TCGAGAGCCG GCTCAAAGGC CGGGAGATCA GGGGAGTTGT CTCGACAAAC GCGCTCGAAC TCGGGATTGA TATCGGGTCG CTCGATGCGG TGATTATCGA CGGTTACCCG GGCACGATGA TGTCCACCCG GCAGCAGGCC GGCCGGGCGG GGAGAAAGGC CGGTGAGTCG CTTGCGGTGC TCGTTGCGCA GGCAAACCCG CTCGACCAGT ACTTCATGCA CCACCCGGAA GAGTTTTTCT CCCGGCCCCA CGAGCATGCG ATCATCGATA CGCAAAACCC GTACATCGTC TCCGGTCACC TCCTGTGCGC AGCAGCGGAA CTTCCCCTCC ATGAAGAAAA GGACCGGGAA TTTTTCGGTG ACCGGTTCTC CCCGGTGCTT TCAGATCTTG CCGGGAGCGG GCTTCTCTCC CGCACCTCCC GGGGCTTTGT GTATGCCGGG AGAGGCCGGG CCGCGGAGGC GGTCACACTT GACGGGATGG CCGCGGAGAG CTTCCGGATC CTCTGCGAGG GCCGGGTGCT TGAAACCATG GACCGGGCGC AGGCATACCG CGAGGCGCAC AAGGGGGCGA TCATGCTCCA CCAGGGCATC ACGTACGTGG TAAATGAGAT GGACCTTGAG AACCACACTG TCCGGGTGAG TGAAACGGAT GTCGATTACT ATACGCAGCC GCTCAAGGAC ACAAGCCTGA AGGTTCTCGA AACGCTTGAA ACCCGGGAGA TACACGGTGT CACCTGTGCA TTCGGCAACG TGGAAGTGAC CGAGCGGTAC ACCGCGTACA AGATTAAGAA GGGCGATACG GTCCTTGGCG TCGAACCGCT CGATCTACCG CCGATCACGT TCCGGACCAA AGCCTTCTGG CTGGTTGTCC CCGAGACTCT TGCCACACCG GTCTGTGCCA GCGGCCTCGA CCTTGCGGGC GGGCTGCACG GGGCCGAGCA TGCACTCATC GCGCTCATGC CCTTCTTTGT TCTCTGCGAC CGCTGGGATA TCGGCGGCCT CTCGTGTCCT GTATTTGGGG AGAGCGGCGA GCCGATGATC TTTATCTACG ATGGGTACGA GGGCGGCATC GGCCTTGCAG AGAAGGCATA CACGCTGCTT CCGGAGCTTT TCACCCGCAC GCACGAGATG GTGCGCGACT GTACGTGCAA GAAAGGCTGC CCGTCCTGCA TCTACTCCCC CAAGTGCGGG AACGATAATA TCCCGCTCGA CAAGGAGGCA ACGGTCATGA TCCTTGCCGG GCTTGCAGCG GCCGGGGCCG GAAATATTAC CATGCCCGGA CAGGCCGGCA TCATCCCGGG CGCCGGGCCG GTGGCACAAT AA
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Protein sequence | MAVADVVHFI STNPVYRSRV ACHNVTDPEP AAYGKLDRPL PDALDAYLAH AGIRLFTHQC EAVNLLREHR NVIITTPTAS GKTLAFNLPV FERMSADPDA RALYLYPTKA LANDQLATLL AMEKFTGIPV KSAIYDGDTP QSKRSAIREH ARIVISNPYE LHQVLSWHSK WSPFFSNLQY VVLDEAHRYR GIFGSQIALL VRRLRRLARY YGTDPQFVLS SATLANPEEF AKRLAGLPFV QVESDGSPRG RRHFVLYNPF FDGVGERSAH QESKDLLVSC VKGDLQALCF AGSRKIAELV ALWAKEDLRR NSPRLAESVL AYRAGYLPEE RRWIESRLKG REIRGVVSTN ALELGIDIGS LDAVIIDGYP GTMMSTRQQA GRAGRKAGES LAVLVAQANP LDQYFMHHPE EFFSRPHEHA IIDTQNPYIV SGHLLCAAAE LPLHEEKDRE FFGDRFSPVL SDLAGSGLLS RTSRGFVYAG RGRAAEAVTL DGMAAESFRI LCEGRVLETM DRAQAYREAH KGAIMLHQGI TYVVNEMDLE NHTVRVSETD VDYYTQPLKD TSLKVLETLE TREIHGVTCA FGNVEVTERY TAYKIKKGDT VLGVEPLDLP PITFRTKAFW LVVPETLATP VCASGLDLAG GLHGAEHALI ALMPFFVLCD RWDIGGLSCP VFGESGEPMI FIYDGYEGGI GLAEKAYTLL PELFTRTHEM VRDCTCKKGC PSCIYSPKCG NDNIPLDKEA TVMILAGLAA AGAGNITMPG QAGIIPGAGP VAQ
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