| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0267 |
|---|
| Symbol | |
|---|
| ID | 5410257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 250061 |
|---|
| End bp | 250669 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640867483 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001403432 |
|---|
| Protein GI | 154149814 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0602] Organic radical activating enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.953431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG CCGAGATTTT TAAAAGTCTC CAGGGAGAAG GCGTGCGGCA GGGGACGCCC
TGCATCTTTA TCCGGCTCGC CGGCTGCAAC CTTGCCTGCC GCTGGTGTGA CACGCAGTAT
GCGCGGTCCG GGGGGACCGA GACTTCCTGC GACAAGATCC TCGAAGAAAT CTGGAAGGAA
AACCCGCGCT CGGTCTGCAT TACGGGCGGT GAGCCTCTCC TCCAGACTGA TGTACTCCTC
CCCCTTCTTG CCTCGCTCCA CAAGCGCGGG ATTACGATCG ACATCGAGAC AAACGGCACG
ATCGATTTTT CTCCCGTTCA GCCGTTCGCC GCGGTCTGCA TGGATGTGAA ATGCCCATCA
TCCGGTGAGA GAAGCGACCT TTCCCTGCTT GCCAGGATCC GCCCGACCGA CAGCGTAAAA
TTCGTGGTGG GGGATCTCGC TGACTGCCGG TATGCACAGG AAGTCCTCGC ACGCCATGCG
ATCGCGGGGG AGTGCTTCCT CTCACCGGTC TACGGTACTG ACTGCGACAC AATTGTCCGG
TTCATCCTGG ACAACAACCT GCCGGTCCGG TTCCAGCTCC AGCTCCACAA GATCCTCGGA
GTGAAATGA
|
|---|
| Protein sequence | MKIAEIFKSL QGEGVRQGTP CIFIRLAGCN LACRWCDTQY ARSGGTETSC DKILEEIWKE
NPRSVCITGG EPLLQTDVLL PLLASLHKRG ITIDIETNGT IDFSPVQPFA AVCMDVKCPS
SGERSDLSLL ARIRPTDSVK FVVGDLADCR YAQEVLARHA IAGECFLSPV YGTDCDTIVR
FILDNNLPVR FQLQLHKILG VK
|
|---|
| |