Gene Mboo_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0250 
Symbol 
ID5410967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp232369 
End bp233505 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content55% 
IMG OID640867466 
Productglycosyl transferase, group 1 
Protein accessionYP_001403415 
Protein GI154149797 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TCCTTGTCTC CACGCAGGAT TACATCCACC ACCCCGTCCC GTCGCGGCAC 
CACTATATCT TCGAGGAACT TGCCAAACGC CATGAGGTAC ACGTGGCGCA TTTCCATGTT
AGCCGAGGGG CTCCCCGCCC CACCCGGCTT ATCGTGGAGG AGGCAACGCA GTTCCCGGTA
AAGAGTCCGC TTCTCCACTA TACGATCAAT GCGCCCTATC ACTACTATAT CTTCAACAGG
ATTATCCGGG AAAAAAAGAT CGATGTTGTT GTTGCCGCAC ACGTCCTTGC CGGGGCAGCG
GTCATCTCTG CGGCAAAGAA AAACCATGTG CCGGCGGTCT TCGATCTCAA GGACTGGTTC
CCCGATTCTG CCGCAGCATA TTTCAAAAAC CGGTTCCTGG CAGATACCGT CCGGAGAGGA
GTCTGGGAGA TCACGAGAAG GAACCTCACC CGCAGCAACC GGATCACTAC GGTCTCCCCA
TCACTGGTGG ATAAACTCAA ACACCTGGGA TTCTCCGCCG AGCTCATCAC AAACGGTGTG
GATACCGATA TCTTCGTGCC GCAGGACGGA TCCCGGACCC GGCAGGAACT GGGTATCGGG
CCTGGTGAAT TTGTTATTGG TTTTTCCGGG AGCATCGAGC GCTGGTATGC AATCGACGAG
ATGATCCGGG CGCTTCCGGA GCTAATCCGG TACCGTAAGG CCACGCGTCT CCTTATTATC
GGGGGATCGC TCTTTACCGA TTATGAAAAA GAGCTCCGGG CGCTTGCACA ATCCCTCGGC
GTTGCCAACC GGGTGATCTT TACCGGGACA AAACCCTACG CGGAGCTTCC CCGGTTCAAT
GCCTGCATGG ATGTCTGCAC GATTCCTCTC TCACCGCCCC AATGGGTAGA CATTGCCCTG
CCCAACAAGT TTTTTGAGTA CTCTGCCTGT GGAAAACCGA TCGTCATGCG CCCGATCCCG
GATGTAACCC GCATCGGGGG CCCAAACCTC TTTGTGTACC GGACACGGGA GGAGTTTGTC
GACCGGATCA AATATCAGAT GGATCACCCG GCCACCTTCC GGATTAATCT CGAAAACTAC
AGCTGGAGGG AGAAGGCCCG CCAGTTCGAG AATATCCTTT CAGAATTATG CACTTAA
 
Protein sequence
MKILLVSTQD YIHHPVPSRH HYIFEELAKR HEVHVAHFHV SRGAPRPTRL IVEEATQFPV 
KSPLLHYTIN APYHYYIFNR IIREKKIDVV VAAHVLAGAA VISAAKKNHV PAVFDLKDWF
PDSAAAYFKN RFLADTVRRG VWEITRRNLT RSNRITTVSP SLVDKLKHLG FSAELITNGV
DTDIFVPQDG SRTRQELGIG PGEFVIGFSG SIERWYAIDE MIRALPELIR YRKATRLLII
GGSLFTDYEK ELRALAQSLG VANRVIFTGT KPYAELPRFN ACMDVCTIPL SPPQWVDIAL
PNKFFEYSAC GKPIVMRPIP DVTRIGGPNL FVYRTREEFV DRIKYQMDHP ATFRINLENY
SWREKARQFE NILSELCT