| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0203 |
|---|
| Symbol | |
|---|
| ID | 5411150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 194729 |
|---|
| End bp | 195256 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640867418 |
|---|
| Product | pyruvate/ketoisovalerate oxidoreductase, gamma subunit |
|---|
| Protein accession | YP_001403369 |
|---|
| Protein GI | 154149751 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
|---|
| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAGG TCAGGATCCA TTCAAGGGGC GGGCAGGGCG GCGTGACCGC GGCCCGGCTC
CTTGCGACTG CAGCACTTCA TGACGGGAAG TATGCTACTG CCTGCCCGTT CTACGGTGCC
GAGCGCCGGG GAGCACCAGT CGTTTCCTTT GTCCGTATCG ATGATCATCC GATCAAAGTC
TACAGCCAGA TTCGGCAGCC GGACCTCGTG GTAGTGCTAG ACGCAAGCGT GATGGAGACC
GTCGATGTGC TCCACGGACT TAAAAAAGGC GGACGGGTGC TCATCAACAG CTCCCATAAG
CCGGAGTTTG CCGGGCACAC AACATTTAAT GTGGACCTGA CCGGCATTGC ACTCAAAGAG
AACCTTGTAG TCGCGGGGAG CCCGATCCTC AACACTCCGG TGCTTGGGGC GCTGGCAAAG
ATGGGAATTG TCTCGCGCGA ATCCGCAAAG GAGGCGATCC GGGGCATGTT CTCCGATGAA
CGTAACGTGA AAGCAGCCGA GGCGGCCTAT AAGGAGATGA GCGCATGA
|
|---|
| Protein sequence | MFEVRIHSRG GQGGVTAARL LATAALHDGK YATACPFYGA ERRGAPVVSF VRIDDHPIKV
YSQIRQPDLV VVLDASVMET VDVLHGLKKG GRVLINSSHK PEFAGHTTFN VDLTGIALKE
NLVVAGSPIL NTPVLGALAK MGIVSRESAK EAIRGMFSDE RNVKAAEAAY KEMSA
|
|---|
| |