Gene Mboo_0191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0191 
Symbol 
ID5411516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp182233 
End bp182895 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content52% 
IMG OID640867406 
Producthypothetical protein 
Protein accessionYP_001403357 
Protein GI154149739 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTCC CGTTCAATAT TATCGATGTG GTACTCCATT TTGACAAGTA CCTCCCGGTT 
ATCCTCCAGC AGTACGGCCT GTGGACCTAC GTGGTTCTGT TCCTGATCCT CTTTTTAGAG
ACCGGTATCG TAATCGCTCC TTTCCTGCCG GGCGATTCCA TGCTTTTTGT TGCAGGGGCG
CTTGCCGGCA CCGGCCTTTT GGACATCCGC ATCCTGCTTG CCACCTTGGT TATCGCGTGT
GTACTCGGGG ACACAGTCAA CTACTGGATC GGGTATACTT TCGAGATGAA GGTGCTGGAA
TGGAGATACT CGCTGGTCAA AAAGGAGCAC CTCGAAGAGA CCCACCGGTA TTTCGAGAAG
TACGGCGGTT TTACTATCGT CATTGCCCGG TTCATGCCCT TTATCCGGAC CTTTGCCCCG
TTTCTTGCCG GTGTCGGGAA GATGCGGTAC TCGTGGTTTG TCGGGTACAA TATCCTTGGC
GGGGTGCTCT GGGCTTCCCT GTTCCTGCTT ACCGGCTATT TCGTGGGGAA TCTCCCGATA
GTCCAGGCAA ACTTTGGGCT CATCACGTAC GCAATCATTG CGATCTCGCT TGTAGCGCTC
GTTTCAGTTT TTGCAAAGAT TTACCTGACG ATGAAAAAGG AAAAAGGGAG CGGGAAGGCA
TAA
 
Protein sequence
MLLPFNIIDV VLHFDKYLPV ILQQYGLWTY VVLFLILFLE TGIVIAPFLP GDSMLFVAGA 
LAGTGLLDIR ILLATLVIAC VLGDTVNYWI GYTFEMKVLE WRYSLVKKEH LEETHRYFEK
YGGFTIVIAR FMPFIRTFAP FLAGVGKMRY SWFVGYNILG GVLWASLFLL TGYFVGNLPI
VQANFGLITY AIIAISLVAL VSVFAKIYLT MKKEKGSGKA