Gene Mboo_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0171 
Symbol 
ID5411709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp169051 
End bp170163 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID640867386 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 
Protein accessionYP_001403337 
Protein GI154149719 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAAGA TCTCCACGGG GAACAAGGCC GTTGCCGAGG CAGTGGCCCT TGCCCGGCCC 
GATGTCGTGG CTGCCTACCC GATCACGCCC CAGTCAGATA TTGTCGAGAC GATCGCGGAG
TTTGTTGCTG CCGGGAAACT CGACACGAAA TATATCCCGG TTGAAAGCGA GCATTCTTCG
ATGGCTGCCT GCATTGGGGC AGGCATTGCA GGGGCGAGGA CGTTTACCGC GACAAGCTCG
CACGGCCTCA CCTATATGCA CGAGATGACC AACTGGGCGG CCGGGGCCCG GCTCCCGGTG
GTGATGGCAA ACGTCAACCG ATCGCTTGCC CCCGGCTGGA ACATCTGGGT CGAACACTCC
GATGCGATCC AGGAGCGCGA TACCGGCTGG CTCCAGATCT GGGTCTCAAC GGTGCAGGAG
GCCTATGACA CCACGCTTAT GGCATTCCGG ATCGCCGAGC ACAACGATGT CCTCCTGCCG
GTGATGATAA ACCTTGACGG ATTTACCCTC TCGCATATCA TGCAGCCGCT CGACACGGTC
GAGCCCGGGG ATTTTATCCC GCCCATCCAC CTGCCCGACC CGGTAGATCC GGCGCATCCG
GCAGGGTACG GCACAATCGC CGGCCCGGCC GACCAGTTCC GGTTCCGGTA CAAAATGGAG
CAGGCAATGC AGGATGCAAA GGCTGTGATC GCAGAGACGG AGCAGGACTT TGCCCGGCGT
TTTGGCCGGA CGTATAGTGC AGCCGAGGAG TACCGGGCCG GCGATGCGGA TGTGGTTGTT
GTGGCCCTTG GCACACTCGG GAAGGAGGCG GAGGTGGCAG TCGATATTCT GCGGGACGAG
GGGATAAAAG CTGGGTCCGT ACGGCCCCGC TGGTTCCGAC CGTTCCCGGA TCTCGACCTT
GCCGGAAAGG AGCTTGTGGT CATTGACCGC GATTATTCGT TTGGGTTTGG CGGGGTGCTG
GCTCATGAGA TCCGGTCCAA ATACCTCACC AAAGTCTTTT CCGTGATCGC CGGCCTCGGC
GGACAGGAGG TCACGTACGA TGATATCGCG GAGTTTGTCC GGAAGCGCCG GATCGGGGAA
GAGTTCTGGT TTGGGGTGAG CGATCATGTT TGA
 
Protein sequence
MRKISTGNKA VAEAVALARP DVVAAYPITP QSDIVETIAE FVAAGKLDTK YIPVESEHSS 
MAACIGAGIA GARTFTATSS HGLTYMHEMT NWAAGARLPV VMANVNRSLA PGWNIWVEHS
DAIQERDTGW LQIWVSTVQE AYDTTLMAFR IAEHNDVLLP VMINLDGFTL SHIMQPLDTV
EPGDFIPPIH LPDPVDPAHP AGYGTIAGPA DQFRFRYKME QAMQDAKAVI AETEQDFARR
FGRTYSAAEE YRAGDADVVV VALGTLGKEA EVAVDILRDE GIKAGSVRPR WFRPFPDLDL
AGKELVVIDR DYSFGFGGVL AHEIRSKYLT KVFSVIAGLG GQEVTYDDIA EFVRKRRIGE
EFWFGVSDHV