Gene Mboo_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0154 
Symbol 
ID5410511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp149538 
End bp150455 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content30% 
IMG OID640867369 
Productrestriction endonuclease 
Protein accessionYP_001403320 
Protein GI154149702 
COG category[V] Defense mechanisms 
COG ID[COG1787] Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAATT ATTTTGAGAC TAAAAAGATC AAAAATGAAA TTTTACATTT AATCCCTAAC 
AAAGAAAATA TCCATAAGGA TATAAAAAAA TTACAAATCC AATTAAATGA AACTGATGAA
GAAATTCGAA TTCTATCAAA AGAAATTGCT GATATTGTAG TTGCAATATC CTTAATTCAA
ACTCAAAAAA ACAAAGGTTT CGAATTATTT GATAATAATT GGGTTCCGAT TGAAGATCTA
CAGAAATTAC GCGAAATAAA AATTGGACTT GCGAAAAACT TTGAAAACAT CTCTCCCTTT
GACTTTGAAT ATTTTGTTGC AATGCTATTG CGAGAAATGG GGTATACAAC TGAAGTGACA
AAGAAAACAG GCGATTATGG AATTGATATA ATTGCAAAAA AGGGAAAACA GATTGTAGCT
GTTCAATGCA AAAGACATAA TGAAAAAAAT CTTATTGGAA ATGTGTTGAT ACAACAACTC
CTTGGGAGTA TGCATTTTAT CAATGCCAGT CATTGTATCT TTATAACAAC TTCCCATTTC
ACAAAAAATG CTATAACTCA ATCTCAGAAT TCACCTATTG AATTATGGGA TAAAGATACG
TTTCATAATT TAGTTAGGAA ATATCTTTTA AATTGCAATA TTGATCAAAT TTTTGATGCT
ATTCAAAAAG ATAAACAGAG GCAAAAAGAG CAAATAGAAC ACGAAAAAAA TGCAATAATT
GAGAAAAAAG CTGAAAAAAA GTTACTCCTT GAGAAACGGA AGCAGGAGAA AACAGCAAAA
AGGGAAATAA AAAAGCTAAA TGACGACGCC AAGAAGATTT GTCCTCGGTG TGGGGGGAAA
AAATGGAAGA GTAGAAAATA TTGCTCAAAA TGTAAACAAG AAATAAAATC CGAAAGAAGA
TACGATAATT GTTGGTAG
 
Protein sequence
MGNYFETKKI KNEILHLIPN KENIHKDIKK LQIQLNETDE EIRILSKEIA DIVVAISLIQ 
TQKNKGFELF DNNWVPIEDL QKLREIKIGL AKNFENISPF DFEYFVAMLL REMGYTTEVT
KKTGDYGIDI IAKKGKQIVA VQCKRHNEKN LIGNVLIQQL LGSMHFINAS HCIFITTSHF
TKNAITQSQN SPIELWDKDT FHNLVRKYLL NCNIDQIFDA IQKDKQRQKE QIEHEKNAII
EKKAEKKLLL EKRKQEKTAK REIKKLNDDA KKICPRCGGK KWKSRKYCSK CKQEIKSERR
YDNCW