| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0144 |
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| Symbol | |
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| ID | 5411207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 138405 |
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| End bp | 140714 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640867360 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001403311 |
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| Protein GI | 154149693 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.263338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCC CAGAGCGGCT TGTTGTTGCG GTCATAGATG ACGAGATCCA TAAGGATACC
CCTCATGGCA GGGCGATCAA ACGGATTATC CGCGACCTTG AAAAATATGA GATTTTTGTT
GCCGATATTG CCTCGCCTGA GGATGCACGA ACCGCGTATT CCAACCTCCC CTCGGTCAAC
TGCATCCTCA TCGACTGGAA CCTGGGTAAC CGGGAGAAGG AGGCACAGCA GGACACGCTC
AAACTGATCC GGCAGATCCG CTGCATCAAC GAAGATCTCC CGATCTTCCT CATGGCAGAG
CCCACAAGCG AGCCACCGAT CGGGATCACG GTGGATGTAC TCAAGGAGAT TAACGAGTAC
CTCTACGTGA TGGAGGACAC CTCCGAGTTT ATCGCCGGGC GTATCTCGGC TGCAGCAAAG
CGGTACCAGG ACCGGCTGCT GCCGCCGTTT TTCGGGGAAC TCGTGAAGTT CTCCAAGGAT
TTCGAGTATT CCTGGCACAC GCCGGGCCAT GCCGGTGGGA CAGCGTTCCG CAAGACGCCC
GCCGGGCGGC GGTTTTTCGA ATTCTTCGGC GAACAGCTCT TCCGGTCCGA TCTCTCCATC
TCGGTCGGGG AGCTTGGCTC GCTTCTCGAC CACTCCGGGC CGGTGGGCGA AGCCGAACGG
TACGCCGCAA AGGTCTTCGG GGCCGACATG TCCTATTTTG TGACAAACGG TACTTCAACG
GCAAACAAGA TCGTCTTTTT TGGCCGGGTT ACCGAGAACG ATGTTGTCCT TGTGGACCGG
AACTGCCACA AATCGGCCGA GCATGCGCTC ACCATGACTC ACTCTGTCGC CGTGTACATG
GTCCCGACCA GGAACCGGTA CGGGATCATC GGCCCGATCC CGCCCTCCGA TATGACACCG
GCAGCTATCA GGAAAAAGAT CGCTGCCTGC CCCTTAGCAA AAAACCTTCC CGACAAAACC
CCGGTCCACG CGATTGTCAC CAACTCGACC TATGACGGCC TCTGCTACCA TGCGGTGGAA
GTGGAAAAGG AACTGGGAAA AAGCGTTGAC AGCATCCATT TCGATGAGGC ATGGTACGGC
TATGCCCGGT TCAACCCGCT CTACCGCGAC CGGTTTGCCA TGCGGGACGG GGCAAAGGAC
AAGAAAGGCC CGACCGTCTT TGCCACCCAG TCAACCCACA AACTGCTCGC CGCGCTCTCG
CAGGCGTCCA TGGTCCATGT AAGAAACGGC CGTGTCCCGA TCGAGCATGC CCGGTTCAAC
GAGGGGTTCA TGATGCACAG CTCCACGTCC CCGCTCTACA CGATCATCGC ATCGCTGGAC
GTGTCCACCA AGATGATGGA CGGGGCATCA GGAAGGCTGC TCACGACCGA GTCAATCGAG
GAAGCAATCC GGTTCCGCCG CACGATGGCA AGAATCGAAA AGGAGATCGG GACCGGCAAG
ACCAGGACCG ACTGGTGGTT CCCCATGTGG CAGCCGGACA CCGTCACGGA TCCGAAAACC
AAAAAGAAGA TCGCGTTTGC CACGGCACCC CTGGAGACCC TGCGGGATAA CCCCTCGTGC
TGGGTGCTGC ACCCGAAGGA TGCATGGCAT GGCTTTGAGG ACCTGCCCGA CAACTACTGC
ATGCTCGATC CCATCAAGGT GACCGTGCTC ACGCCCGGCG TCAAAGAGGA TGGATCGCTT
GCTGCATGGG GCATCCCGGC AGCCATTGTT GTCAAGTTTT TGGACACCCG GGGCATCATC
AATGAGAAGT CCGGGGATTA CTCGATCCTC TTCCTCTTCT CGATGGGGAT CACGAAAGGC
AAGTGGGGTA CCCTTATTAC CGAGCTCTTC GAGTTCAAAC GCCGTTACGA TGAGAACGCC
CCGCTTGACG AGGTCTTCCC TGACCTTGTG GCACAGTGGC CGGATCGGTA CGGCGGCATG
ACCCTGCCGG AGCTTGCGGC CCAGATGCAC GCGTTCAAGC GCGACCACAA CATGTGTGGA
TTGCTCCAGA AAGCGTTCTC GGCCCTTCCG GAGCCGGTGA TCACGTACGC GGAATCCTAC
AAGAGACTCG TGCGGGACGA GGTAGAGCAG ATACCGGTTG CGCAGGCGGC AAACCGCATC
GTGGCAACAG GTATCGTGCC CTACCCGCCG GGCATCCCGC TGCTTGCACC TGGCGAGAAG
ACCGGGCCAA AGACCGGCCC GGTGCTCCAG TACCTGCTCT CGCTGCAGGA TTTTGACCGG
CGCTTCCCCG GCTTTGAGCA CGACACCCAC GGGATCGAGA GCATCAAAGG TGAATACAGG
ATGATCTGTG TAAAGGAGAA GAAACGATGA
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| Protein sequence | MSSPERLVVA VIDDEIHKDT PHGRAIKRII RDLEKYEIFV ADIASPEDAR TAYSNLPSVN
CILIDWNLGN REKEAQQDTL KLIRQIRCIN EDLPIFLMAE PTSEPPIGIT VDVLKEINEY
LYVMEDTSEF IAGRISAAAK RYQDRLLPPF FGELVKFSKD FEYSWHTPGH AGGTAFRKTP
AGRRFFEFFG EQLFRSDLSI SVGELGSLLD HSGPVGEAER YAAKVFGADM SYFVTNGTST
ANKIVFFGRV TENDVVLVDR NCHKSAEHAL TMTHSVAVYM VPTRNRYGII GPIPPSDMTP
AAIRKKIAAC PLAKNLPDKT PVHAIVTNST YDGLCYHAVE VEKELGKSVD SIHFDEAWYG
YARFNPLYRD RFAMRDGAKD KKGPTVFATQ STHKLLAALS QASMVHVRNG RVPIEHARFN
EGFMMHSSTS PLYTIIASLD VSTKMMDGAS GRLLTTESIE EAIRFRRTMA RIEKEIGTGK
TRTDWWFPMW QPDTVTDPKT KKKIAFATAP LETLRDNPSC WVLHPKDAWH GFEDLPDNYC
MLDPIKVTVL TPGVKEDGSL AAWGIPAAIV VKFLDTRGII NEKSGDYSIL FLFSMGITKG
KWGTLITELF EFKRRYDENA PLDEVFPDLV AQWPDRYGGM TLPELAAQMH AFKRDHNMCG
LLQKAFSALP EPVITYAESY KRLVRDEVEQ IPVAQAANRI VATGIVPYPP GIPLLAPGEK
TGPKTGPVLQ YLLSLQDFDR RFPGFEHDTH GIESIKGEYR MICVKEKKR
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