Gene Mboo_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0135 
Symbol 
ID5411198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp128369 
End bp129679 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID640867351 
Producthypothetical protein 
Protein accessionYP_001403302 
Protein GI154149684 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAGA AAAGGCGCCT ATTTTTGCAG GCGCCGGTTG GTACCATGGT CAGCGTCTAT 
CGTTTTGCCG GGGTGCGTCC CGCACCGGGC GAGGCACAGT CTATTGCAGC CGTCCCGTAC
GATGTCGTAA CCGCAGACGA GGCGCGGGCG ATCATTGCAC AAAACCCGAA GAGCTTTCTT
ACCGTGAGCC GGTCCGATGC AGAGCTTCCC GGCCTTTCAC CTCACGATGA TCAGGTGTAC
GAACGGGCTC GGGAGAATTT CTCTGCCCTT CTTTCAAACG GCCGACTGGT AAAGGACAGA
CAGCCCGCAA TGTACGTGTA TCGGATCCGG CAGGACAACG ACACCTTCGT GGGCATCTTC
TGCGCCCTGG ATACCGAGGA CTACCGCGCC AACCGGATCC GGCGCCACGA GCTGACCCGG
TACGACAAGG AAGAGGACCG GACCCGGCAT ATCGAGGCCG TCCAGGCTCA TGACGGCCCG
GTGGTGCTCC TGTACCGCGA TCCCGGAACG CTTTTTTCGT TCATCGAATC GCTGGTTGCC
ACAAGAAAAA ATCCGGATGC AGAGGCCCAC ACTCCGCAGG GTGGCATCCA CCAGATCTAT
GCGGTCACCG ATCCGGAGGC ACTCGATGAG ATCGAACGCC GGTTCCGGGA CATCCCCTCC
CTGTACATTG CTGACGGCCA CCACCGTGCC AAGGCTGCAG TCAACCTTGC CGACCGGCTG
CGGGCGGCAG GAAAGCCGGC TGATGGCGAG GTCGGGCGGT TCATGGGCGT GCTCTTCTCG
TACGAGCGGG TGAAGATCCA CGGGTACAGC CGGCTCCTGA CCGATCTCGG TTCCTATACC
ACGGAGACGT TCCTTGCGGG CCTTGGGAAA CTGTACAAGG TCGCCCCGTA CGGCACCGTG
GACGGGAGCG GGTTCAACAT CCCGCCGCAT ATCACCCACC CGGAAAAATT CCACGTCATG
CACCTGTACC TTGACGGGAA ATGGTACGAG TGCGCCCGGC CCATTGATCC AAACGCCGGC
CCGCTCGATA TTCTCGATGT AGCGGTGCTC CAGAAGCTCG TACTTGAAGG AATGCTCGGC
ATCACCGATC CCCGGGGCGA TGCCCGGCTC CAGTACCTCG GCGGTGCCCG GCCAGTAGCC
GATCTCGAAA AACTTGTGGA TGCCGGTACC TACCGGCTCG CGCTTGCCAT GCAGCCGGTC
CGGGTTGCAA CCGTGCTCTC CATAGCCGAT GCCAGCGGTG TCATGCCCCC CAAGTCCACA
TGGTTTGAAC CAAAACTCCT TTCGGGTCTT GTTATCCACT CGTTTGCGTG A
 
Protein sequence
MYQKRRLFLQ APVGTMVSVY RFAGVRPAPG EAQSIAAVPY DVVTADEARA IIAQNPKSFL 
TVSRSDAELP GLSPHDDQVY ERARENFSAL LSNGRLVKDR QPAMYVYRIR QDNDTFVGIF
CALDTEDYRA NRIRRHELTR YDKEEDRTRH IEAVQAHDGP VVLLYRDPGT LFSFIESLVA
TRKNPDAEAH TPQGGIHQIY AVTDPEALDE IERRFRDIPS LYIADGHHRA KAAVNLADRL
RAAGKPADGE VGRFMGVLFS YERVKIHGYS RLLTDLGSYT TETFLAGLGK LYKVAPYGTV
DGSGFNIPPH ITHPEKFHVM HLYLDGKWYE CARPIDPNAG PLDILDVAVL QKLVLEGMLG
ITDPRGDARL QYLGGARPVA DLEKLVDAGT YRLALAMQPV RVATVLSIAD ASGVMPPKST
WFEPKLLSGL VIHSFA