Gene Mboo_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0096 
Symbol 
ID5411090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp86435 
End bp87112 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content57% 
IMG OID640867310 
Productmethyltransferase type 12 
Protein accessionYP_001403263 
Protein GI154149645 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATA TCAAAAAGGC CTTTGACGCG GTGGCTACCG AGTACGATGC ACAGCGCGAG 
CATGTCATCC CCGATATGCG GAACTATTAC GGTGCTGCGG TCTGGGCAGC AGAGAGCCCC
TCTCAAGCCC CCGCAATTCT TGATGTGGGG GCGGGGACCG GGCTGCTCTC CGCTCTTCTC
CTGGAAAAAT ACCCGGGAGC AGCGATCACT CTGCTCGATA TATCAGAGAA GATGCTCGCT
GTCGCAGAGG AGCGATTTTC CAAAAAAGAG AACGTCAGCT TCCGGACCGG GGATTATGCG
CAGGCAGATC TCGGCGGGCC CTACGACCTT GTCTGTTCCG CGCTCTCGAT CCATCACCTT
GAACCCGGCG ACAAGCGCCG GCTCTTTTTG AAGATCTACC GGGCCCTCTC CCCGGGCGGG
ATCTTTGTCA ACGCCGACCA GGCCGAGGGT GAGACACCGT ATTTTTCAGA GCGGTACCTT
GCGTACTGGA ATGATTTCCT TGCAAACGGG CCGCTTTCTG CGCACGAGCA TGCCGAGATC
TTAAAACGCC GCAATACGCT TGACAAAAAC GAGAAACTCT CGGTCCAGCT CGCATGGCTC
CGCGAGGCAG GATTTTCCGA TGTCGATGTA GTGTACCGGA ACCGGACATT TATTGTGACG
GTGGCAGGGA AGGCCTGA
 
Protein sequence
MEHIKKAFDA VATEYDAQRE HVIPDMRNYY GAAVWAAESP SQAPAILDVG AGTGLLSALL 
LEKYPGAAIT LLDISEKMLA VAEERFSKKE NVSFRTGDYA QADLGGPYDL VCSALSIHHL
EPGDKRRLFL KIYRALSPGG IFVNADQAEG ETPYFSERYL AYWNDFLANG PLSAHEHAEI
LKRRNTLDKN EKLSVQLAWL REAGFSDVDV VYRNRTFIVT VAGKA