| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0086 |
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| Symbol | sdhA |
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| ID | 5411058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 78204 |
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| End bp | 79832 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640867300 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001403253 |
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| Protein GI | 154149635 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.970646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCAG ACGGGGTTGT GGACTGCCAT GTGCTGGTAA TTGGGAGCGG CGGCGCAGGA
GTACGGGCTG CAATCGGGGC GGCCCGGTAC GGAACAACCC TGCTTCTCTC AAAGACCCTC
GCGGGAAAGG GCGGGTGCAC CCCGATGGCA GAAGGCGGCT ACAATGCAGT GCTGCGCGAG
GCCGACTCCT GCGAGATCCA TTACGAGGAC ACCCTGCGGG GCGGGGCGTT CCTCAACGAG
CCGGAACTTG TCCGGATCCT GGTGCAGGAA TCCCCGGAGA GGGTCAACGA GCTGGTCGGC
TGGGGGGCGG TCTTTGATTT CACCAATGAA TGCGAGATTG CCCAGCGTCC GTTCGGGGGC
CAGCGGTTTC CCCGGACCTG CTATGCAGGT GACCGGACCG GTCACGAAAT GATGATGACG
CTCATGGAGC GTTTCGATTC CTCGGGTGCG ACAAAGATGG AAGAAGTGAC CGCGATCGAT
CTGCTCAAGG AAAGCGGACG GGTGATCGGG GCCTTTGCCC TTGACGAGAA CGGGGACGAG
GTGATCATCA CCGCGGACAG CACCATCCTT GCTACCGGAG GGGGTTCCCG GGTCTATGAC
ATTTCCACGA ACTCGTCGAG CGGCACCGGG GACGGCTTTG CTATGGGCTA CCGGGCCGGG
GCCGAACTCA TCGACATGGA GATGGTGCAG TTCCACCCGA CCGGCGCAGT GTACCCCTAC
GATGCCCGGG GCCGGCTCAT CACGGAAGCC GTGCGGGGCG AGGGAGGCAT TCTCAAAAAC
TCTCTGGGCG AGCGGTTCAT GAAACGCTAT GACCCGGTCC GGATGGAGCT CTCCACCCGG
GACGTGGTGG CCCGGGCGAT CGCTACCGAG ATTGCAGCCG GCCGGAGTAC GCCGCACGGG
GGGGTGTACC TGGATGTCAC GCACCTCCCA AAAGAGCAGA TCGAGACCCG GCTCCCGCTG
ATGCTCGAAC AGTTCCTGAC CTACGGGGTG GACATCCGTA CGCAGCCCAT GGAAGTAGCT
CCCACCGCCC ACCACATCAT GGGCGGGATC CGGATCACGC CGAAGTGTGC AACCACCGTG
CCGGGCCTCT TTGCCTGCGG TGAGACCGCC GGGGGCGTGC AGGGTGCAAA CAGGCTTGGA
GGAAACGCCC TTGCCGAGAC CCAGGTCTTT GGGAAACGCG CCGGGGAGGC GGCCGGGCAG
GGTGAGAGGC GGGTAAAGAA GATCGATCCC GCACAGCTGG CGGAGATCCG GGCACGGACA
GAGGGCTTCC TCTCGGGAAC AAAAAACCCG GCCCATGTCA GAAAGGAACT CCAGAAAACA
ATGTGGCAGG ATGCCGGTAT CTTCCGGGAC GAGGCCGGGC TTAAGCGTGC GCTTGCCACG
GCAGAACATC TGCTCACAGC TCCGATCCGG GCGGCCTCTC CTGCCGGGAT TGTGGAGTGC
TGCATAGTGC AGAACATGTG CCTGACGGCA GCGCTCATCT GCCGTTCGGC TCTTGCCCGG
CCGGAATCCC GTGGTGCAAA CATGCGGGTG GACCTCGCAC AGGAATGGGA TGCGGAGCAC
TCGCCCTACG GCCACACGTA CATCTCGAAG CACCGCCAGG GAATTTCCCG GCACGGGGTG
CCGGCATGA
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| Protein sequence | MRADGVVDCH VLVIGSGGAG VRAAIGAARY GTTLLLSKTL AGKGGCTPMA EGGYNAVLRE
ADSCEIHYED TLRGGAFLNE PELVRILVQE SPERVNELVG WGAVFDFTNE CEIAQRPFGG
QRFPRTCYAG DRTGHEMMMT LMERFDSSGA TKMEEVTAID LLKESGRVIG AFALDENGDE
VIITADSTIL ATGGGSRVYD ISTNSSSGTG DGFAMGYRAG AELIDMEMVQ FHPTGAVYPY
DARGRLITEA VRGEGGILKN SLGERFMKRY DPVRMELSTR DVVARAIATE IAAGRSTPHG
GVYLDVTHLP KEQIETRLPL MLEQFLTYGV DIRTQPMEVA PTAHHIMGGI RITPKCATTV
PGLFACGETA GGVQGANRLG GNALAETQVF GKRAGEAAGQ GERRVKKIDP AQLAEIRART
EGFLSGTKNP AHVRKELQKT MWQDAGIFRD EAGLKRALAT AEHLLTAPIR AASPAGIVEC
CIVQNMCLTA ALICRSALAR PESRGANMRV DLAQEWDAEH SPYGHTYISK HRQGISRHGV
PA
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