Gene Mboo_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0073 
Symbol 
ID5411722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp67132 
End bp67992 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content55% 
IMG OID640867287 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_001403240 
Protein GI154149622 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGA ACCTTGGCAT CGCGTCCCCG GGTGTCCCCA CTATTATTAT CGGGAACCAT 
ACACTGGTCG GGGAAGACCA GATCCGGGAC CAGCTGGAAC AGGTGATCCT CGCAGAACAG
GCCACTTCGG GTGGCCCGGC CCAGGGAAAT CTCACCGTGG CGGAGAACAG TCCCGGCACG
TTCTCCCACC TGACCGTCCC CCTGGTAATC GTTGCTGCAG GGATCGACAG CCTCAATCCC
TGCGCCTTTA CGGTCTTAAT TATCCTCCTG CTCTCCATTA TTGCGCTCCA GAGCCGCCGG
CAGGTGCTGA TAGTGGGCGT CACCTATATC GCCGCGGTTT TTTTGTTCTA CTTTATCTCC
GGCATTGGGG TCCTTTCGTT TGTGCACCTT TCGGGGATCT CCAGTCTCAT AGCGCTTGCT
GCCGCTGTCA TCGCCATCGT CCTTGGGGTG GTAAATATTA TTGAAGCGGC GGTGAAAAAA
GACGGATTTT TCCTTGCGAT CCCCGAATCG AAGAAACCGG TGATTGAGCG GTATATTACA
ACCGCCACAC TGCCTGCCGC ATTTGTGCTT GGCGTCCTTG TGGGGATTTT CGAGTTGCCC
TGCACCGGGG GGATCTATCT GACCATCCTT GGCCTGATCA GCAACACCCT CACATTCACC
GAGGGAATTC CTTATCTTCT TCTTTATAAT TTAATCTTTG TTCTGCCGCT CATCGTCATC
CTTCTCGCTG TTGTCCTGGG TATTCCCCCT GAGCGGGTGA ACACCTGGAG GCTTGAGAAC
CGCCGGAAGC TCCGGTTTGC CATAGGGGTT GCGATGATCC TTGTCGGTGC CTTTATCCTT
ATCGGCCCCC GGCTCCTGTA A
 
Protein sequence
MDQNLGIASP GVPTIIIGNH TLVGEDQIRD QLEQVILAEQ ATSGGPAQGN LTVAENSPGT 
FSHLTVPLVI VAAGIDSLNP CAFTVLIILL LSIIALQSRR QVLIVGVTYI AAVFLFYFIS
GIGVLSFVHL SGISSLIALA AAVIAIVLGV VNIIEAAVKK DGFFLAIPES KKPVIERYIT
TATLPAAFVL GVLVGIFELP CTGGIYLTIL GLISNTLTFT EGIPYLLLYN LIFVLPLIVI
LLAVVLGIPP ERVNTWRLEN RRKLRFAIGV AMILVGAFIL IGPRLL