Gene Mboo_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0066 
Symbol 
ID5410275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp59744 
End bp61642 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content58% 
IMG OID640867280 
Productacetate--CoA ligase 
Protein accessionYP_001403233 
Protein GI154149615 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR02188] acetate--CoA ligase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA ACTTCGATGT CAAACTCGTG GAGAACGCGA AGTACTACAC ACCAGATGCG 
GAGTACAAGC GTTCATCGTG GATAGGAGAC TACCAGGAAG CATACCGGCG GTTTCTTGCC
GATCCGGATG CATTCTGGGA GACAATCGCA CGGGAGCTCG AATGGATCCG GCCCTGGGAC
CGGGTCTGCG AGTGGACATA TCCCTATGCC CGGTGGTTTG TGAATGCACA GCTCAACATT
ACCGCAAACT GCCTTGATCG CCATGTGGCT GGTGACCGGA GAAACAAGGT TGCCCTTATC
TGGCGGGGCG AAGACGGCAA GGAGCGGGTG TATTCCTACC AGCGGCTGCT CGGGGAAGTT
TCGCGATTTG CAAACGGCCT CAAAAAACTC GGTGTGAAAA AAGGCGACCG GGTCTGTATC
TACATGCCCA TGGTACCCGA ACAGCTGATA GCCATGCTCG CCTGCGCCCG GATCGGTGCC
GTGCACAGCG TTGTCTTTGC CGGTTTCGGG ACAAGTGCCC TGAACCTGCG GATCAATGAT
GCCGAGGCCA AAGTCGTGAT CACCGCAGAT ATCTCGATCC GGCGCGGCAA GGCAATCCCC
CTGATCACCA TTGTCCAGGA GGCGATCGTC CATGCACCGT CAGTGGAACA CGTAGTCATC
TACCGGAGGC GCAAGGAACC TCCGGTCGAG CTCCACCCGG GACGGGAGCA TGACTTCTAC
GGGATCATGG AGGATGTACC AGCAGAATGT CCCTGTGAGA CCATGGACGC GGAAGACCCG
CTCTTTGTCC TCTACACGAG TGGATCGACC GGCACACCCA AAGGAGTGGT TCACACCTGC
GGTGGCTACA TGGTCGGGGC GTACTACTCC ACCAAAACGG TCTTTGATCT CAAGGAGCGG
GACATCTACT GGTGCACGGC GGATCCCGGC TGGATCACCG GCCACACCTA TATCGTGTAC
GGCCCGCTCG CAGTCGGCGC CACGGTGTTT ATCACCGAGA TCACCCCGGA TTATCCGGAT
CCCGGCAGCT GGTGGAAGCT CATCCAGGAG CAGCAGATCT CGGTCTTCTA CACAGCCCCG
ACGGCAATCC GGACGTTCAT GAAAGTGGGG GAGGACTGGC CCAACCGGTA CAACCTCAGC
TCGCTGCGCA TCATCGGATC GGTGGGAGAA CCGCTCAACC CCGAGGCATT CGAATGGTAT
TACCGGGTGA TAGGAAAAAG CCGCTGCCCA ATCGTGGACA CTTGGTGGCA GACTGAGACC
GGAATGCAGA TGATCACCAC CATGGTCGGA GAACCGATGC GACCGGGCTT TGTGGGAAAA
CCCATCCCGG GCGTTGAGGT GGATGTTACC GACAAGAACG GAAACCCGGT ACCCCCGGGG
ACCGGTGGTT TCCTCGTAAT CAAAAGACCA TGGCCGTCCA TGCTCCGCAC CGTATACAAG
AATGATGCCC GGTACCGGCA GTACTGGGAG ACCATCAGCG GCGTGTACGC AGCTGGCGAT
CTGGCGGTCA AGGGATCTGA CGGGTACATC ATGGTGATCG GCAGGGCTGA TGATATCATC
ATCGTCTCAG GCCACAACAT CGGGACGGCA GAAGTCGAGA GCGCGCTTGT CTCCCATCAC
GCGGTGGCCG AGGCTGCGGT GATCGGGAAA CCCGATGCCA TCAAGGGGAA CGCCATCAAG
GCCTTTGTCA TCCTCCGGGT GGGAAACACA CCGAGCGAGA AGCTGACACA GGACCTGATC
TACCATGTAC GCATGACTCT GGGGCCCGTC GCTGTACCCC ATGAGATCGA ATTTGTCGAC
AAACTGCCCA AGACCCGCAG CGGCAAGATC ATGCGCCGGG TCTTAAAAGC AAAGGAGCTC
GGGATGGATC CCGGGGATAT CTCGACTCTC GAGGAATAA
 
Protein sequence
MKENFDVKLV ENAKYYTPDA EYKRSSWIGD YQEAYRRFLA DPDAFWETIA RELEWIRPWD 
RVCEWTYPYA RWFVNAQLNI TANCLDRHVA GDRRNKVALI WRGEDGKERV YSYQRLLGEV
SRFANGLKKL GVKKGDRVCI YMPMVPEQLI AMLACARIGA VHSVVFAGFG TSALNLRIND
AEAKVVITAD ISIRRGKAIP LITIVQEAIV HAPSVEHVVI YRRRKEPPVE LHPGREHDFY
GIMEDVPAEC PCETMDAEDP LFVLYTSGST GTPKGVVHTC GGYMVGAYYS TKTVFDLKER
DIYWCTADPG WITGHTYIVY GPLAVGATVF ITEITPDYPD PGSWWKLIQE QQISVFYTAP
TAIRTFMKVG EDWPNRYNLS SLRIIGSVGE PLNPEAFEWY YRVIGKSRCP IVDTWWQTET
GMQMITTMVG EPMRPGFVGK PIPGVEVDVT DKNGNPVPPG TGGFLVIKRP WPSMLRTVYK
NDARYRQYWE TISGVYAAGD LAVKGSDGYI MVIGRADDII IVSGHNIGTA EVESALVSHH
AVAEAAVIGK PDAIKGNAIK AFVILRVGNT PSEKLTQDLI YHVRMTLGPV AVPHEIEFVD
KLPKTRSGKI MRRVLKAKEL GMDPGDISTL EE