| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0063 |
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| Symbol | |
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| ID | 5410272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 56578 |
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| End bp | 57936 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640867277 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001403230 |
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| Protein GI | 154149612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.636154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCA AGATCCTCCT TGACGAGGAG CAGATCCCCA AAAAGTGGTA TAATGTCCAG
GCCGACCTGC CCTCGCCGCT CGATCCCCCG CTCCACCCAC AGACCCATAA ACCGGTTGGG
CCAGCGGACC TCTCCGCGAT CTTTCCCATG GAACTGATCC GGCAGGAAGT GACGACCGAT
CGGTACGTGG ATATTCCTGA AGAGGTGCGG GAAGTGTTCC GGCTCTACCG GCCAAGCCCG
CTCTATCGTG CTCACCGGCT TGAGAAGGCC CTGAAAACCC CGGCAAAGAT CTACTACAAG
TGGGAGGGCG TGAGTCCGGC CGGGAGCCAC AAGACCAACA CATCGATCCC GCAGGCCTAC
TACAACATGA AGGCTGGCAT CGAACGGATC GCGACAGAGA CCGGTGCCGG ACAGTGGGGT
TCTGCCATGT CCTTTGCCAC AATGCTCTAC GATCTCGAGT GCACCGTGTA CATGGTCCGG
TCGAGTTACA CACAGAAGCC GTACCGGAAA TCCATGATGC AGGTCTGGGG TGCGGAGTGC
ATCCCGAGCC CGAGCACAAA GACAAAGTCC GGGCAGGCAG TTCTTGCAAA AGATCCCGAC
ACTCCCGGTG CGCTTGGGAT TGCGATCTCG GAAGCGGTCG AGGATGCGGC AAGCCACAGC
AACACGAACT ATGCGCTCGG CTCGGTCTTA AACCACGTCT GCCTCCACCA GACCGTGATC
GGCCTTGAGT GCCGTGAGCA GCTGGCAAGT GTCGATGCCT ACCCTGACGT GGTGATCGGG
TGCGTGGGTG GCGGCTCGAA CTTTGCCGGC ATCTCGTTCC CGTTTGCCGG GGACAAGCTT
GTCGGGAAGC ACAAGGACGT TGACATCCTC GGTGTTGAGC CGGCATCGTG CCCCAGCCTC
ACCAAGGGGC TGTACACCTA CGACTTCGGC GACGAGGCGG GCTACACCCC GCTCATGAAG
ATGTTCACGC TCGGCCACGA CTTTGTCCCG CCATCAATGC ACGCCGGGGG CCTGCGCTAC
CACGGGGATT CGCCCATTGT GTCGAGGCTC GTCCATGACG GCGTGATGCG GGCTGTCGCC
TATCACCAGA GCGAAGTATT CGAAGCAGCC CAGACCTTTG CCCGGGCCGA GGGCATCATC
GTTGCCCCGG AGACCTCTCA TGCAGTAAAG GGCGCGATCG ATGAAGCGCT TGCCTGCAAA
AAGACCGGTG AGGAAAAGAC AATCCTCTTC AACTGCACCG GCCACGGCAA CTTCGATATG
AGCGCCTACG ATGCATTCTA CAGCGGGAAT CTTGTGGACT ACGAATACCC GGACAGACTG
ATCAAAGAGG CCCTCGGGCG GATCCCGAAG ATCGCATAA
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| Protein sequence | MQTKILLDEE QIPKKWYNVQ ADLPSPLDPP LHPQTHKPVG PADLSAIFPM ELIRQEVTTD
RYVDIPEEVR EVFRLYRPSP LYRAHRLEKA LKTPAKIYYK WEGVSPAGSH KTNTSIPQAY
YNMKAGIERI ATETGAGQWG SAMSFATMLY DLECTVYMVR SSYTQKPYRK SMMQVWGAEC
IPSPSTKTKS GQAVLAKDPD TPGALGIAIS EAVEDAASHS NTNYALGSVL NHVCLHQTVI
GLECREQLAS VDAYPDVVIG CVGGGSNFAG ISFPFAGDKL VGKHKDVDIL GVEPASCPSL
TKGLYTYDFG DEAGYTPLMK MFTLGHDFVP PSMHAGGLRY HGDSPIVSRL VHDGVMRAVA
YHQSEVFEAA QTFARAEGII VAPETSHAVK GAIDEALACK KTGEEKTILF NCTGHGNFDM
SAYDAFYSGN LVDYEYPDRL IKEALGRIPK IA
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