Gene Mboo_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0054 
Symbol 
ID5410948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp47953 
End bp48414 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID640867268 
Productriboflavin synthase 
Protein accessionYP_001403221 
Protein GI154149603 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1731] Archaeal riboflavin synthase 
TIGRFAM ID[TIGR01506] riboflavin synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGG GTGTCGCTGA CACCACTTTC TCACGCGTTA ATATGGGAGC GATCGCTATC 
GACGAGCTCA AAAAGCACGC GAGCGTGGCG ATCGAGCGGG TGACCGTACC GGGAATGAAG
GACCTGCCGG TTGCCTGCAA GAAACTGATC GAAGAGCGCC GCTGCGATAT TGTGATGGCT
CTGGGGATGC CGGGGGGAAA GGAGAAGGAC AAGACCTGTG CCCACGAGGC ATCGCAGGGG
CTCATCATGT GCCAGCTCAT GACAAACCAC CACATCATCG AGGTCTTCGT GCACGAGGAC
GAGGCAAAGG ATGATGCGGA ACTTGCATGG CTTGCCGAGC AGCGCACCCG GGAGCACGCG
GTCAATGCCG TAAAACTCGT CCTCCACCCG GAGGCCCTAA CGAAAGACGC CGGAACCGGC
CAGCGTCAGG GATTTTCTGA CGCCGGCCCT GCCCGGCGGT AG
 
Protein sequence
MKVGVADTTF SRVNMGAIAI DELKKHASVA IERVTVPGMK DLPVACKKLI EERRCDIVMA 
LGMPGGKEKD KTCAHEASQG LIMCQLMTNH HIIEVFVHED EAKDDAELAW LAEQRTREHA
VNAVKLVLHP EALTKDAGTG QRQGFSDAGP ARR