Gene Mboo_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0049 
Symbol 
ID5410943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp43523 
End bp44047 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content53% 
IMG OID640867263 
Producthypothetical protein 
Protein accessionYP_001403216 
Protein GI154149598 
COG category[S] Function unknown 
COG ID[COG3797] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT TTGTTGCATT CCTCCGTGGT ATCAATGTTG GCGGGAATAA TCTTATTCCC 
AAAAAAGAGT TGGCAGTTAT TGGTGAGCGG GCCGGCCTCG CGGGAATCTG CACCTATATT
AACAGTGGAA ATATTCTTTT TACCAGCAAC CGCTCCGAAG AGGAACTCGC GGCAGCGCTT
GAAAAGGTGC TGGCAGGAAC AACCGGAAAG GAGATCCGGG TTGTCATCCG CAGCGCAGAG
GAGCTTGACG GAATCGTCAG GAGTAACCCG TTCCCGGACG CAATTCCGTC ACAAGTGGGG
GTCATGCTCG TTACCGTGCC TGTTGGAAAG GATATTCTTG CAGAATTTGT CATCCCGGGA
CGGGAGATTG CTGCTGCCGG GAAACGGGAA GTCTACGTTT ACTACCCTGA CGGCATGGGC
CGCTCGAAAC TTAAATGGCC GCCTTTATTG AAAACCGGGA CGATGCGGAA CATCACCACG
CTCACGAATC TTGCCGGTCT CGCGGGTGAA AAGGATGGGA TGTAA
 
Protein sequence
MTTFVAFLRG INVGGNNLIP KKELAVIGER AGLAGICTYI NSGNILFTSN RSEEELAAAL 
EKVLAGTTGK EIRVVIRSAE ELDGIVRSNP FPDAIPSQVG VMLVTVPVGK DILAEFVIPG
REIAAAGKRE VYVYYPDGMG RSKLKWPPLL KTGTMRNITT LTNLAGLAGE KDGM