Gene Mboo_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0047 
Symbol 
ID5410941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp41975 
End bp42478 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content52% 
IMG OID640867261 
Productanti-sigma-factor antagonist 
Protein accessionYP_001403214 
Protein GI154149596 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGTC ATCCCAATGT TGTTTTCCGG GACATTTTTA GACAACTGGA AAAGATCTCC 
CTTTTTTTTT CCAACTTCCC CGCCATTTTA TATTCACCGG TAAGATGTTC CCTCGCAATA
GTTCAGGTGA TAGAAATGGA GATCCACCAC GAAATATCCC GGGGAATCGT CATCGTAACG
TTCTCCGGGT GGCTCGATAC AACCTCGGCC GGGAAATTTT TGGAGTACTG TGTACTCCTG
CCGCCGGCTA CCCCGATCAT TTTTGATCTT TCGAGACTCT CCTTTCTGAG CAGGACCGGC
CTTCGTGCGC TGCTCCGGTT CAGGAATATG AGGGCTTCGA CGGGATCTGT TGTGGTTATT
GCGGGTAGCA GGGGTTTTGT CGATACTGCG CTGAAAATGA ACCGGTTTAA CCGGCTCTTT
CCGATGTATC TCTCTGTTGC CGATGCAATC CCGGCTATTG CAACGGCTGC GGCCCCGATT
CCCCGTGTGT GGGGAGGTGC ATGA
 
Protein sequence
MARHPNVVFR DIFRQLEKIS LFFSNFPAIL YSPVRCSLAI VQVIEMEIHH EISRGIVIVT 
FSGWLDTTSA GKFLEYCVLL PPATPIIFDL SRLSFLSRTG LRALLRFRNM RASTGSVVVI
AGSRGFVDTA LKMNRFNRLF PMYLSVADAI PAIATAAAPI PRVWGGA