Gene YpsIP31758_4152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4152 
SymboldnaN 
ID5386785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4687786 
End bp4688886 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID640867180 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001403094 
Protein GI153950603 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value5.17824e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA TCATTGAACG TGAGCATCTG CTAAAACCAC TGCAACAGGT CAGTAGCCCG 
CTGGGTGGAC GCCCTACGTT GCCTATTTTG GGTAACTTGT TGCTGCAAGT CACGGAAGGC
TCTTTGCGGC TGACCGGTAC CGACTTGGAG ATGGAGATGG TGGCTTGTGT TGCCTTGTCT
CAGTCCCATG AGCCGGGTGC TACCACAGTA CCCGCACGGA AGTTTTTTGA TATCTGGCGT
GGTTTACCCG AAGGGGCGGA AATTACGGTA GCGTTGGATG GTGATCGCCT GCTAGTGCGC
TCTGGTCGCA GCCGTTTCTC GCTGTCTACC TTGCCTGCGA TTGACTTCCC TAACCTAGAT
GACTGGCAGA GTGAGGTTGA ATTCACTTTA CCGCAGGCTA CGTTAAAGCG TCTGATTGAG
TCCACTCAGT TTTCGATGGC CCATCAGGAT GTCCGTTATT ATTTGAACGG CATGCTGTTT
GAGACCGAAG GCGAAGAGTT ACGTACTGTG GCGACCGATG GGCATCGCTT GGCTGTATGC
TCAATGCCTA TTGGCCAGAC GTTACCCTCA CATTCGGTGA TCGTGCCGCG TAAAGGTGTG
ATGGAGCTGG TTCGGTTGCT GGATGGTGGT GATACCCCCT TGCGGCTGCA AATTGGCAGT
AATAATATTC GTGCTCATGT GGGCGATTTT ATTTTCACAT CTAAGCTGGT TGATGGCCGT
TTCCCGGATT ATCGCCGCGT ATTGCCGAAG AATCCTGATA AAATGCTGGA AGCCGGTTGC
GATTTACTGA AACAGGCATT TTCGCGTGCG GCAATTCTGT CAAATGAGAA GTTCCGTGGT
GTTCGGCTCT ATGTCAGCCA CAATCAACTC AAAATCACTG CTAATAATCC TGAACAGGAA
GAAGCAGAAG AGATCCTCGA TGTTAGCTAC GAGGGGACAG AAATGGAGAT CGGTTTCAAC
GTCAGCTATG TGCTTGATGT GCTAAATGCA CTGAAGTGCG AAGATGTGCG CCTGTTATTG
ACTGACTCTG TATCCAGTGT GCAGATTGAA GACAGCGCCA GCCAAGCTGC AGCCTATGTC
GTCATGCCAA TGCGTTTGTA G
 
Protein sequence
MKFIIEREHL LKPLQQVSSP LGGRPTLPIL GNLLLQVTEG SLRLTGTDLE MEMVACVALS 
QSHEPGATTV PARKFFDIWR GLPEGAEITV ALDGDRLLVR SGRSRFSLST LPAIDFPNLD
DWQSEVEFTL PQATLKRLIE STQFSMAHQD VRYYLNGMLF ETEGEELRTV ATDGHRLAVC
SMPIGQTLPS HSVIVPRKGV MELVRLLDGG DTPLRLQIGS NNIRAHVGDF IFTSKLVDGR
FPDYRRVLPK NPDKMLEAGC DLLKQAFSRA AILSNEKFRG VRLYVSHNQL KITANNPEQE
EAEEILDVSY EGTEMEIGFN VSYVLDVLNA LKCEDVRLLL TDSVSSVQIE DSASQAAAYV
VMPMRL