Gene YpsIP31758_4146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4146 
Symbol 
ID5388336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4680422 
End bp4681384 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content53% 
IMG OID640867174 
Producthypothetical protein 
Protein accessionYP_001403088 
Protein GI153949828 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGT TGTTTGATGC CATCAGAGAG GCCCACCAGA TATTACGCCC ACAAGTGAGA 
GTCACGCCGT TGGAGCATAG CCCACTGCTA TCTCAACACA GCGGTTGTGA GATCTATCTT
AAATGTGAGC ACCTGCAGCA CACCGGTTCT TTTAAATTTC GTGGGGCCAG TAACAAGTTA
CGTTTACTCA ATGAGGCACA ACGCCAGCAA GGTGTGATCA CCGCCTCCAC CGGTAACCAT
GGGCAAGGTG TGGCGCTGGC CGCAAAACTG GCGGGGATTA AATCCACTAT TTACGCCCCA
GAACAGGCGG CAGCCATCAA GCTGGATGTG ATCCGTGCAC TGGGGGGGCA AATTGAATTA
GTCTCCGGAG ATGCCTTAAA TGCTGAACTG GCCGCCGGTA TCGCCGCTGA GCAACAAGGT
AAAGTGTATA TCTCACCGTA TAACGACCCG CAGGTCATTG CCGGGCAAGG CACCTGTGGC
ATGGAGATGG TCGAACAGCA GCCCGAGCTT GATGCGGTGT TTGTTGCCGT TGGTGGTGGT
GGCCTGATTT CAGGTATTGC GACCGTATTG AAAACATTAT CGGATAAAAC GCAGGTGATT
GGTTGCTGGC CAGCCAATGC CACCAGCCTG TATACCTGTC TGGAGAAGGG ACAGATTCAG
GAGGTGGCAG AGCAAGAAAC GCTGTCTGAC GGAACCGCCG GTGGTATCGA ACCGGGAGCG
ATCACCTTTG CACTGTGCCA ACAGTTAATC GATCAGAAGG TGCTGGTGAG TGAGCAAGAA
ATCAAAGAGG CCATGGGTTT GATTGCCCGT ACTGACCGCT GGATGATTGA AGGTGCCGCC
GGTGTAGCAC TGGCTGCGGC ACTGAAATTG GCTCCGCAAT GGCAAGGTAA GAAAGTGGCG
GTGGTGTTGT GCGGTAAAAA TATCGTGCTG GAGAAATATC TGGGAGCTGT CAGCGGATGC
TAA
 
Protein sequence
MNTLFDAIRE AHQILRPQVR VTPLEHSPLL SQHSGCEIYL KCEHLQHTGS FKFRGASNKL 
RLLNEAQRQQ GVITASTGNH GQGVALAAKL AGIKSTIYAP EQAAAIKLDV IRALGGQIEL
VSGDALNAEL AAGIAAEQQG KVYISPYNDP QVIAGQGTCG MEMVEQQPEL DAVFVAVGGG
GLISGIATVL KTLSDKTQVI GCWPANATSL YTCLEKGQIQ EVAEQETLSD GTAGGIEPGA
ITFALCQQLI DQKVLVSEQE IKEAMGLIAR TDRWMIEGAA GVALAAALKL APQWQGKKVA
VVLCGKNIVL EKYLGAVSGC