Gene YpsIP31758_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4135 
Symbol 
ID5387330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4667688 
End bp4668347 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content54% 
IMG OID640867164 
Productputative outer membrane lipoprotein 
Protein accessionYP_001403078 
Protein GI153949077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC GTCTTCTGGC TCCTGTGGCC ATCGTCTCCG TCGCACTGAT CCTCTCAGCC 
TGTACCACTA ATCCTTATAC CGGTGAGTCG CAAGCCGGTA AATCGGGTTA TGGTGCTGGT
ATCGGTGCCG CGCTGGGGGC AGGAATTGGT CTGTTGTCAT CGTCTAAACA TGATCGTGGT
AAAGGTGCAT TAATTGGTGC AGCGGCGGGC GCGGCATTAG GGGGCGGGGC TGGGTACTAC
ATGGATGTGC AGGAAGCCAA ATTACGTGAA AAAATGAGCG GTACCGGTGT AAGCGTCACC
CGTCAGGGCG AGAACATTGT CTTGAATATG CCGAATAACG TTACCTTTGA TACCAATAGC
AGTAACCTGA AACCTGCCGG AGCCAATACC CTGACTGGCG TCGCCATGGT ATTGAAAGAG
TATGATAAAA CTGCGGTCAA TGTGACCGGT TATACCGACA GTACGGGTGC CCGCGCCCAT
AATATCGTGC TCTCGCAACA GCGGGCGGAT AATGTGGCGA GCGCACTGAT CGTGCAGGGC
GTCGCTGCCA ACCGTATCCG CACTTATGGC GCTGGCCCCG ATAACCCAGT CGCGTCTAAC
AGTACTGCCG CCGGTAAAGC GCAAAACCGC CGGGTTGAAA TCACCTTAAG CCCACTGTAA
 
Protein sequence
MKKRLLAPVA IVSVALILSA CTTNPYTGES QAGKSGYGAG IGAALGAGIG LLSSSKHDRG 
KGALIGAAAG AALGGGAGYY MDVQEAKLRE KMSGTGVSVT RQGENIVLNM PNNVTFDTNS
SNLKPAGANT LTGVAMVLKE YDKTAVNVTG YTDSTGARAH NIVLSQQRAD NVASALIVQG
VAANRIRTYG AGPDNPVASN STAAGKAQNR RVEITLSPL