Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4110 |
Symbol | mdfA |
ID | 5385412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4637831 |
End bp | 4639060 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640867140 |
Product | multidrug translocase MdfA |
Protein accession | YP_001403054 |
Protein GI | 153949984 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACTT CATTTTCACC CGCGACACGC TTAGGTCGAC GGGCGCTTTT ATTCCCTCTC TGCTTAGTAT TGTTCGAATT TGCAGCGTAT ATCGCCAACG ATATGATCCA GCCAGGTATG CTGGCAGTGG TCGCCGAGTT TAATGCCAGT GTCGAGTGGG TTCCAACCTC TATGACCGCT TATCTGGCGG GGGGGATGTT CCTACAATGG CTTCTAGGGC CGTTGTCTGA CCGCCGTGGG CGTCGTCCAG TGATGTTGGC TGGGGTCGCT TTCTTTGTCG TGACTTGCCT TGCCATTTTA CTGGTTAATA GCATTGAACA GTTCATCGCA ATGCGCTTCT TGCAAGGCAT TGGCTTGTGC TTTATCGGTG CCGTCGGTTA CGCCACTATT CAGGAATCTT TTGAAGAAGC GGTCTGTATT AAAATCACCG CGTTAATGGC CAATGTGGCA TTGATTGCTC CGTTGCTTGG CCCATTGGCC GGTGCTGCCC TGATCCATGT GGCTCCCTGG CAAACCATGT TCGTCTTGTT TGCAGTGCTG GGGGCAATTT CATTTGCCGG CCTGTGGCGC GCGATGCCAG AAACTGCTTC GCTGAAAGGG GAGAAACTGT CAGTTGCCAA CATGTGGCGT GATTATAAGC AAGTACTTGC TAACCGCCGC TTCCTCTGTG GTTCTTTAGC ATTGGGCTTT GCCAGCCTGC CTTTGCTGGC ATGGATTGCC CAGTCACCGG TAATTTTGAT CAGCGGAGAG CAACTCTCTA CTTTTGAATA TGGCATTTTG CAGGTACCAA TTTTCGGCGC ACTGATTATA GGTAACCTGA CACTGGCACG ATTGAGCGGT AAAACCAGCA TTCCTCAACT CATCCGTTAC GGCGCTGGCC CAATGATTGT TGGCCTGATG ATCGCCGCCG GTTCAACACT CTATTCATCC CATGCCTATC TGTGGATGAC CGCCGGGTTG AGCCTGTATG CTTTTGGTAT CGGTCTGGCG AACGCCGGTC TGGTGCGGTT GACACTATTC GCCAGTGATA TCAGTAAAGG AACCGTCTCT GCGGCCATGG GGATGATCAG CATGATGATC TTCACCTTAG GTATTGAGTT GGCCAAAGTG GCTTACCTGT GGGGCGACAG TGGGGGGTTT AATCTGTTTA ACCTGATGAG CGGTTTACTG TGGCTAGGCT TGGTGATGGT GTTCATCCGC CGCCAACCCG AGGCGGTTGC TACCGAGTAA
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Protein sequence | MQTSFSPATR LGRRALLFPL CLVLFEFAAY IANDMIQPGM LAVVAEFNAS VEWVPTSMTA YLAGGMFLQW LLGPLSDRRG RRPVMLAGVA FFVVTCLAIL LVNSIEQFIA MRFLQGIGLC FIGAVGYATI QESFEEAVCI KITALMANVA LIAPLLGPLA GAALIHVAPW QTMFVLFAVL GAISFAGLWR AMPETASLKG EKLSVANMWR DYKQVLANRR FLCGSLALGF ASLPLLAWIA QSPVILISGE QLSTFEYGIL QVPIFGALII GNLTLARLSG KTSIPQLIRY GAGPMIVGLM IAAGSTLYSS HAYLWMTAGL SLYAFGIGLA NAGLVRLTLF ASDISKGTVS AAMGMISMMI FTLGIELAKV AYLWGDSGGF NLFNLMSGLL WLGLVMVFIR RQPEAVATE
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