Gene YpsIP31758_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4110 
SymbolmdfA 
ID5385412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4637831 
End bp4639060 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content52% 
IMG OID640867140 
Productmultidrug translocase MdfA 
Protein accessionYP_001403054 
Protein GI153949984 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTT CATTTTCACC CGCGACACGC TTAGGTCGAC GGGCGCTTTT ATTCCCTCTC 
TGCTTAGTAT TGTTCGAATT TGCAGCGTAT ATCGCCAACG ATATGATCCA GCCAGGTATG
CTGGCAGTGG TCGCCGAGTT TAATGCCAGT GTCGAGTGGG TTCCAACCTC TATGACCGCT
TATCTGGCGG GGGGGATGTT CCTACAATGG CTTCTAGGGC CGTTGTCTGA CCGCCGTGGG
CGTCGTCCAG TGATGTTGGC TGGGGTCGCT TTCTTTGTCG TGACTTGCCT TGCCATTTTA
CTGGTTAATA GCATTGAACA GTTCATCGCA ATGCGCTTCT TGCAAGGCAT TGGCTTGTGC
TTTATCGGTG CCGTCGGTTA CGCCACTATT CAGGAATCTT TTGAAGAAGC GGTCTGTATT
AAAATCACCG CGTTAATGGC CAATGTGGCA TTGATTGCTC CGTTGCTTGG CCCATTGGCC
GGTGCTGCCC TGATCCATGT GGCTCCCTGG CAAACCATGT TCGTCTTGTT TGCAGTGCTG
GGGGCAATTT CATTTGCCGG CCTGTGGCGC GCGATGCCAG AAACTGCTTC GCTGAAAGGG
GAGAAACTGT CAGTTGCCAA CATGTGGCGT GATTATAAGC AAGTACTTGC TAACCGCCGC
TTCCTCTGTG GTTCTTTAGC ATTGGGCTTT GCCAGCCTGC CTTTGCTGGC ATGGATTGCC
CAGTCACCGG TAATTTTGAT CAGCGGAGAG CAACTCTCTA CTTTTGAATA TGGCATTTTG
CAGGTACCAA TTTTCGGCGC ACTGATTATA GGTAACCTGA CACTGGCACG ATTGAGCGGT
AAAACCAGCA TTCCTCAACT CATCCGTTAC GGCGCTGGCC CAATGATTGT TGGCCTGATG
ATCGCCGCCG GTTCAACACT CTATTCATCC CATGCCTATC TGTGGATGAC CGCCGGGTTG
AGCCTGTATG CTTTTGGTAT CGGTCTGGCG AACGCCGGTC TGGTGCGGTT GACACTATTC
GCCAGTGATA TCAGTAAAGG AACCGTCTCT GCGGCCATGG GGATGATCAG CATGATGATC
TTCACCTTAG GTATTGAGTT GGCCAAAGTG GCTTACCTGT GGGGCGACAG TGGGGGGTTT
AATCTGTTTA ACCTGATGAG CGGTTTACTG TGGCTAGGCT TGGTGATGGT GTTCATCCGC
CGCCAACCCG AGGCGGTTGC TACCGAGTAA
 
Protein sequence
MQTSFSPATR LGRRALLFPL CLVLFEFAAY IANDMIQPGM LAVVAEFNAS VEWVPTSMTA 
YLAGGMFLQW LLGPLSDRRG RRPVMLAGVA FFVVTCLAIL LVNSIEQFIA MRFLQGIGLC
FIGAVGYATI QESFEEAVCI KITALMANVA LIAPLLGPLA GAALIHVAPW QTMFVLFAVL
GAISFAGLWR AMPETASLKG EKLSVANMWR DYKQVLANRR FLCGSLALGF ASLPLLAWIA
QSPVILISGE QLSTFEYGIL QVPIFGALII GNLTLARLSG KTSIPQLIRY GAGPMIVGLM
IAAGSTLYSS HAYLWMTAGL SLYAFGIGLA NAGLVRLTLF ASDISKGTVS AAMGMISMMI
FTLGIELAKV AYLWGDSGGF NLFNLMSGLL WLGLVMVFIR RQPEAVATE