| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4076 |
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| Symbol | |
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| ID | 5385899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4594042 |
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| End bp | 4595712 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640867104 |
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| Product | ShlB/FhaC/HecB family haemolysin secretion/activation protein |
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| Protein accession | YP_001403020 |
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| Protein GI | 153950209 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCGT TTAAAGTTTT CGCTGAAACG GCGTTGCCAG AAATGGGCCT GCTTGAAATG
GATATAGCCG AGCCACAGAT CCCAAATAGT ATTATTCCTC CTCTATCACA TGCTCAACTG
GCCAGTGAAC CGACTCTGCC AGAGAATCTT TATAATGATG AAGTACAATG TGTAGCAATT
AAGAATGTCG AATTGATTAA TATTGATGCC TTCCCAAATG CAGCACGCTT AAAAGAAAAG
GCTGAAGAAG CTCACGGGCG TTGCCTGGGG GAACAGGGGC TGTCAGTGCT TGTGGCTAAC
TTACAACAAC AATTAGTGGT TGATGGCTAT ATCACCTCTC GTGTGGTTTT TGTCGATGAC
AGTGAGCGTG ACGGCACGTT AACGCTGAAA TTAATGCCCG GTAGGATTGA GGATATCAGG
CATCATCAAG ACAGCGCCGG CAATGCTCAG CTCAGCTCCC TTTTTCCCGG TAAACGTGGT
GATTTGGTTA ATTTACGTCA CCTTGAGCAA GGGTTAGAAA ACTTGCAGCG CTTGACTTCA
GTGAATGCCA CCATGGATAT CGAATTAAAT CGGGACGATT TAAGTAGCCA GATTATCGTG
AATCGCCAGC AATCACGTCT CTGGCGTATT AATGCCTACC TTGATGATGC CGGGCATGAT
GCCGTTGGCC GCTATCGTAC GGGCCTAATA TTGTCTTTTG ATAATCCATT ATCCCGTTAT
AACCCCTTGT CTCTCAGTGA TTTACTCTAC TTCTCTGTTA ACCGTGACCT TGATAGCCAA
CCCGATAAAG GGCACAACAG CTACGGGATT CATTATTCTG TCCCGTATGG CAACTGGCTA
TTTAGCATGA CGGGCAATCA AGGTGAGCAT TATCAATCGT TCTCTTTTGC CGGTAAAAGA
CTTGCCGGTA AAAAATTTGG CTATCGTTCC CATTGGTCTG TATTGGATAC ACAAATTCAA
CATTTACTCA CCCGTGGAGT AAATTATAAA ACAGTGGGTT ATGCCGGGGT GTTAATTCGT
CAGTCTGCCA GTTTTTGGAC CCATCGGGAG ATAGATATTC AGCGGTTCAA TACCACGGAC
TGGCAGCTAG GGATTGAGCA TCTACATTAC ATGCCATGGG CGACTTTCAG AGGGGGGGTT
CGTTATCAAC AGGGGGCTTC ATGGTTTGGT GCCCAACCTA TTCCCGGTAA AATGAGCACT
GCACCGGCGA GGTTGGTCGA TATCACCAGC TCACTGGATA TCCCTTTTAA GATCGGAACA
CAGTCCTTCC AGTATCGGCC CGCTTTCAGC CAGCAACATA CCTACTCGGA TATTAGTTCA
CTGGATAAAT TTACGATTGG TGGCAGGAGT TCAGTGCGAG GTTTTAATGA GAATAACGCT
CTGACGGGGT CACGGGGGTG GTCTCTAAAA AATGACATTT CATGGATCAG CCCGATACCC
GGTCAGACAT TCGTAGGCCA GCAACTTTAT ATCGGCATGG ATTATGGTGA GGTGAGTGAG
CAGGGCCAAC CATTTCTTTT GGGCGAGCGT TTAGCGGGTG CCGTGGTAGG GACTCGTGGA
AATTATCATG CGTTTGGTTA CGATTTTAAT GTCGGCGTGC CGATAACCAA ACCCGCTGAA
TTTGATGCTG ATCCGTTGGT TTTTGGGTTT ACGCTAACTT GGCAATATTA G
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| Protein sequence | MLPFKVFAET ALPEMGLLEM DIAEPQIPNS IIPPLSHAQL ASEPTLPENL YNDEVQCVAI
KNVELINIDA FPNAARLKEK AEEAHGRCLG EQGLSVLVAN LQQQLVVDGY ITSRVVFVDD
SERDGTLTLK LMPGRIEDIR HHQDSAGNAQ LSSLFPGKRG DLVNLRHLEQ GLENLQRLTS
VNATMDIELN RDDLSSQIIV NRQQSRLWRI NAYLDDAGHD AVGRYRTGLI LSFDNPLSRY
NPLSLSDLLY FSVNRDLDSQ PDKGHNSYGI HYSVPYGNWL FSMTGNQGEH YQSFSFAGKR
LAGKKFGYRS HWSVLDTQIQ HLLTRGVNYK TVGYAGVLIR QSASFWTHRE IDIQRFNTTD
WQLGIEHLHY MPWATFRGGV RYQQGASWFG AQPIPGKMST APARLVDITS SLDIPFKIGT
QSFQYRPAFS QQHTYSDISS LDKFTIGGRS SVRGFNENNA LTGSRGWSLK NDISWISPIP
GQTFVGQQLY IGMDYGEVSE QGQPFLLGER LAGAVVGTRG NYHAFGYDFN VGVPITKPAE
FDADPLVFGF TLTWQY
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