| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4031 |
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| Symbol | |
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| ID | 5387842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4538245 |
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| End bp | 4540800 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640867061 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | YP_001402977 |
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| Protein GI | 153948092 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAAC CCCGCCTCTC CTTCTTTGCC AGTGTTCGTG GGCGATTGTT GTTCTTCAAC
TTGCTCGTGG TGGCGGTCAC CCTGATGGTG AGTGGCGTAG CGGTGCTGGG CTTCGAGCAG
GCAAGCCGCT TACAGAAGCA GGTCCAGGAG CGGACACTGC GCGATATGTC AAGCAGCCTG
GCGCTGGCGC GCGATACCGC AAATGTGGCG ACGGCGGCGG TGCGGCTTTC CCAAGTGGTT
GGTGCGCTTG AATTCCAGAG TGAAGCGGCC AGTCTTCAAG AGACGCAACT GGCGTTACAA
ACTTCACTCG CTCATCTTGC TAACGCCCCG CTTGCCAGCC ATGAACCGCT ATTGGTGAAG
CGTATCATTG AGCGTAGCAA TGAACTGGAA ACCAGCGTTG CACGTATGCT GAATTTGGGT
CACCGTCGCC ATCTTGAGCG TAACCTGCTG CTGAGCGCCC TCTATCAGAC CCAAAGTTAT
CTTCACCATT TACAGGAGAT TAACCAGCGC GATGGGCTGA ACAAACCCGA TGCCGCACTG
CTAAAAGAGA TGGATCGCCT GCTACTGGTG GCTATCCAGA CCTCCTCGCC CAAAGCTGCC
GTACAGCAAC TTACTGAGGT GATGCAGGCA TTGCCTGCCC ATGCTGACTC GCCGCTGGTG
GAGGAAATCT TGCAAGAGTT CAGCGCCAGC CTGTATCAGC TGCTGCCGTT GTCCATCACG
CTTGAAAATA GCGATCTGAG CATTACCTGG TACATGTACC ACGTCAAAGC GTTGGTGGCG
TTTCTCAATC AGGGCATCAA TATCTATGTA CAAAAGGTGG GGGAGGAATC GCTGCAGCGT
AGCCAACAAA ACCACAAAGC CTTGCAATCG ATCATCACGT CTATTGGTCT GTTTGCCCTG
TTGGCACTGG TTATCACCGG GTTTGCCGGC TGGTATATCT ACCATAACCT TGGCTCTAAC
TTAACGGCGA TATCTCATGC CATGACCCGA TTGGCAAGAG GAGAAAAAGA GGTCAGCGTA
CCAGCCCAAC AACGGCGTGA TGAACTGGGC GAACTGGCTC GCGCGTTTAA CGTTTTTGCC
CGCAACACCG CTTCGCTGGA GCAGACATCA CGTCTTCTGA AAGAGAAAAG TACGCTGTTG
GAAACCACCT TTCACGCTAT GCGCGATGGC TTTGCCCTGT TCGACAACGA GGGCTTTCTG
GTGGTGTGGA ACCCGCAATA CCCACTGTTG CTGGGGCTGG CACCGGAGCA GCTACAGCAT
GGTCAGCACT ACCTTCAATT ATTGAAGCAG ATGACGCCAC TGCAAGAGCA TATACTTGAG
AACCTCGCCC TCCCGCTGCC AAAAACCCAA GAGCTAAGGC TTGAGGACCA TCGCACTATC
GAACTGCGTT TCAGCCCGGT TCCCGGACGA GGGATGGTTA ATGTGGTGCT GGATCGTAGC
GAGCGCAAAG CACTGGAAGA AGCACTGGTC CATAGCCAAA AAATGAAGGC GGTAGGGCAG
CTCACGGGTG GCCTGGCTCA TGATTTTAAT AACCTGCTGG CGGTGATTAT TGGCAGTCTT
GAGCTAACCG CTACGGACTC GTCGGATGCC ACGCGCATTC ATCGTGCTCT GAAGGCCGCT
GAGCGGGGGG CGCAACTCAC CCAACGGTTG CTGGCGTTCT CACGCAAGCA GTCGCTTCAC
CCTCGAGCTG TTGCGATGAA AGAACTACTT GATAACCTGG ACCCGCTGAT ACGCCACTCG
CTTCCGGCTC ATCTTACGCT CACAATTGAA GCTCAGCAGC CTGCCTGGCA CGCCTGGATA
GACGTAAACC AACTGGAAAA CGCAATTATC AATCTGGTGA TGAATGCTCG CGACGCGATG
GAAGGGCGCA GCGGCGAGAT TAAAATCCGC ACCTGGAATC AACGCGTAGA GCGTGGTGAA
GGGCGCAAAC AGGATATGGT GGTGCTGGAA GTGGCTGATA GCGGCCATGG CATGACCACC
GCAGTGAAAG AGCAGGTTTT TGAACCCTTC TTCACCACCA AGCAAACCGG TAGCGGGAGT
GGGCTTGGGC TGTCAATGGT ATACGGCTTT GTGCGCCAGT CCGGAGGGCG GGTACAGATA
GAAAGTGAAC CGGGGAAAGG GACGCGGGTC TGCTTGCAGT TACCCCGCGC ACTCACACAA
AGTCTGATAG AAGTCCTGCC AGCGCTTGGT GCCGTTGCGA ATATGGCTGA TCAGCTAGTC
TTAGTGCTGG AAGATGAGCC GGATGTACGC CAGACCCTGT GCGAGCAACT CCATCAACTG
GGCTACCTGA CGCTTGAAAC CGGCGACAGT CGGCAGGCGC TGGCATTGAT GGCCGACGTG
CCGGATATCA GCATTGTGAT AAGCGACTTA ATGCTACCCG GCGACCTGAC CGGTGCGGAA
GTGCTTCAGC AAGCGCGCAG TGTTTATCCT CATCTTAAGC TGTTGTTAAT TAGTGGCCAG
GATCTGCGGC GCAGCAAGAA TTTCATGCCG GAGGTGGAAC TGCTGCGTAA GCCTTTTAAC
CAACAACAGC TAGTACAGGC GCTGCAAAGA GTCTGA
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| Protein sequence | MEQPRLSFFA SVRGRLLFFN LLVVAVTLMV SGVAVLGFEQ ASRLQKQVQE RTLRDMSSSL
ALARDTANVA TAAVRLSQVV GALEFQSEAA SLQETQLALQ TSLAHLANAP LASHEPLLVK
RIIERSNELE TSVARMLNLG HRRHLERNLL LSALYQTQSY LHHLQEINQR DGLNKPDAAL
LKEMDRLLLV AIQTSSPKAA VQQLTEVMQA LPAHADSPLV EEILQEFSAS LYQLLPLSIT
LENSDLSITW YMYHVKALVA FLNQGINIYV QKVGEESLQR SQQNHKALQS IITSIGLFAL
LALVITGFAG WYIYHNLGSN LTAISHAMTR LARGEKEVSV PAQQRRDELG ELARAFNVFA
RNTASLEQTS RLLKEKSTLL ETTFHAMRDG FALFDNEGFL VVWNPQYPLL LGLAPEQLQH
GQHYLQLLKQ MTPLQEHILE NLALPLPKTQ ELRLEDHRTI ELRFSPVPGR GMVNVVLDRS
ERKALEEALV HSQKMKAVGQ LTGGLAHDFN NLLAVIIGSL ELTATDSSDA TRIHRALKAA
ERGAQLTQRL LAFSRKQSLH PRAVAMKELL DNLDPLIRHS LPAHLTLTIE AQQPAWHAWI
DVNQLENAII NLVMNARDAM EGRSGEIKIR TWNQRVERGE GRKQDMVVLE VADSGHGMTT
AVKEQVFEPF FTTKQTGSGS GLGLSMVYGF VRQSGGRVQI ESEPGKGTRV CLQLPRALTQ
SLIEVLPALG AVANMADQLV LVLEDEPDVR QTLCEQLHQL GYLTLETGDS RQALALMADV
PDISIVISDL MLPGDLTGAE VLQQARSVYP HLKLLLISGQ DLRRSKNFMP EVELLRKPFN
QQQLVQALQR V
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