Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4026 |
Symbol | |
ID | 5385815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4532929 |
End bp | 4533789 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640867056 |
Product | hypothetical protein |
Protein accession | YP_001402972 |
Protein GI | 153947900 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTGA TTTCCCTTGC AAATGGCCTG GCTCATGCCA GGAAAAACGG TTACGCATTG GGTGCCTTTA ACGTGCTCGA TAGCCACTTT TTGCGCGCCC TGTTTGCCGC TGCAAAACAG GAACGATCGC CGTTTATCAT CAATATTGCT GAAGTCCATT TTAAGTACCT TTCGCTAGAA TCATTGGTAG AAGCAGTGAA ATTCGAAGCT GCACACCATG ATATCCCGGT GGTGCTTAAT CTCGACCACG GCCTGCACTT TGAAGCCGTG GTCCGCGCAC TCAGGCTGGG TTTTAGTTCG GTAATGTTTG ATGGTTCCAC ACTTGAATAT GAAGAAAACG TTCGCCAGAC CCGTGAAGTT GTGAAGATGT GCCATGCCGT GGGTGTATCG GTGGAAGCTG AACTGGGCGC TGTTGGCGGT GATGAAGGCG GTGCGCTTTA TGGTGAAGCT GATAGCAATA AATTCACCGA TCCCGCCATC GCCCGGGACT TTGTTGACCG TACCGGTATC GATGCCTTAG CGGTCGCCAT CGGCAACGCA CACGGCAAGT ATAAAGGTGA ACCCAAGCTC GACTTCGCGC GTCTGGCCGC CATTCATCAG CAAACCGGCC TACCTCTGGT ACTGCACGGT GGCTCTGGGA TCAGCGATAC CGATTTCCGG CGGGCTATCA GCCTTGGCAT TCATAAAATC AATTTTTATA CCGGCATGTC GCAGGCAGCG CTGGCTGCCG TGGAACAGAA AATGACTCAT CGACACGCTA TTTATGACGA GTTCGCCGAG TTGTTCCTGG GGATCGAGGA GGCTATTACT GATGTCGTAG CGCAACAAAT GCGAATTTTC GGCAGTTCAG AGCAAATCTG A
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Protein sequence | MALISLANGL AHARKNGYAL GAFNVLDSHF LRALFAAAKQ ERSPFIINIA EVHFKYLSLE SLVEAVKFEA AHHDIPVVLN LDHGLHFEAV VRALRLGFSS VMFDGSTLEY EENVRQTREV VKMCHAVGVS VEAELGAVGG DEGGALYGEA DSNKFTDPAI ARDFVDRTGI DALAVAIGNA HGKYKGEPKL DFARLAAIHQ QTGLPLVLHG GSGISDTDFR RAISLGIHKI NFYTGMSQAA LAAVEQKMTH RHAIYDEFAE LFLGIEEAIT DVVAQQMRIF GSSEQI
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