Gene YpsIP31758_3977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3977 
SymbolhslO 
ID5385763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4460978 
End bp4461859 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content49% 
IMG OID640867008 
ProductHsp33-like chaperonin 
Protein accessionYP_001402925 
Protein GI153948993 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAATC ACGACCAATT ACACCGCTAT CTGTTTGCTA ATCATGCTGT GCGCGGTGAA 
CTGGTTTCAG TTAATGAAAC CTACCAACAG GTATTAGCTA ACCATGATTA CCCACCAGCG
GTACAGAAAC TGTTGGGTGA AATGTTGGTC GCGACCAGCC TGCTGACGGC CACCCTGAAA
TTTGATGGCG ATATTACCGT GCAATTACAG GGCGGTGATG GCCCCTTAAC ACTGGCGGTC
ATTAACGGTA ATAACCGGCA GGAAATGCGC GGTGTTGCTC GCGTTAAAGG CGAAATCAGC
GATGACAGCA CACTGCAAGA GATGGTCGGT AACGGCTATC TGGTTATCAC CATTACACCT
GCACAAGGCG AACGCTATCA AGGGGTTGTG GCATTAGAAG GTGAAACTAT CGCGGCCTGC
CTGGAAAATT ACTTCATGCA GTCAGAGCAG TTACCGACCC GCCTGTTTAT CCGCACCGGG
CATGTCGCCG ATAAAGCGGC GGCAGGTGGC ATGCTCCTGC AAGTACTGCC AGCGCAGGAA
CGTAATGAAG ATGAATTTGA CCATCTGGCA CAGCTGACAG CGACCATTAA AGCTGAAGAG
TTATTCACAC TGCCAGCCAA TGAAGTGCTG TATCGCCTGT ATCATCAGGA GGAGGTGACG
CTGTATGAGC CACAAAATGT CAGCTTCCGC TGTACCTGCT CCCGCCAACG TTGTGCCGAT
GCCTTAGTGA CGCTAGCTGA CGATGACGTC ACCGAAATGC TCGAGCAAGA TGGCAATATT
GATATGCATT GTGAATATTG CGGTAACCAT TATCTGTTTG ATGCAGTTGA TATTGCTACA
TTAAAAAATG GCAACAGCGC CTCTTCTGAA CAAATTCATT AA
 
Protein sequence
MSNHDQLHRY LFANHAVRGE LVSVNETYQQ VLANHDYPPA VQKLLGEMLV ATSLLTATLK 
FDGDITVQLQ GGDGPLTLAV INGNNRQEMR GVARVKGEIS DDSTLQEMVG NGYLVITITP
AQGERYQGVV ALEGETIAAC LENYFMQSEQ LPTRLFIRTG HVADKAAAGG MLLQVLPAQE
RNEDEFDHLA QLTATIKAEE LFTLPANEVL YRLYHQEEVT LYEPQNVSFR CTCSRQRCAD
ALVTLADDDV TEMLEQDGNI DMHCEYCGNH YLFDAVDIAT LKNGNSASSE QIH