Gene YpsIP31758_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3942 
Symbol 
ID5387530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4418700 
End bp4419569 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID640866973 
Productputative phosphoribulokinase 
Protein accessionYP_001402890 
Protein GI153949974 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACTA AACATCCGGT TATCGCCGTC ACTGGCTCAA GTGGTGCGGG TACGACCACC 
ACCAGTCTGG CTTTTCGCAA AATTTTTCAG CAGTTAGATA TTCGCGCAGC ACAGATTGAA
GGTGACAGTT TCCATCGCTA TACCCGCCCA GAAATGGATG CCGCCATTCG TAAGGCGCGG
GATCAAGGCA GACATATCAG CTATTTTGGC CCAGAAGCGA ATGATTTTGG TCAGTTAGAA
CAAAGCGTGG CGGAATACAG CAAACACGGT ACTGGCCGCT CGCGTAAGTA TTTACATACC
TATGATGAAG CAGTGCCTTA TAACCAAATC CCTGGCACCT TTACTCCTTG GGAGCCGCTA
CCGGAACCCA CGGATGTTTT ATTCTATGAA GGGCTGCATG GCGGGGTCGT GACCGAGCAT
CATGATGTTG CAAAACATGT GGATCTGTTG GTCGGTGTGG TGCCTATTGT CAATTTGGAG
TGGATTCAAA AATTAGTGCG GGATACCGGT GAGCGCGGCC ATTCCCGTGA GGCGGTGATG
GATTCCGTGG TGCGGTCAAT GGACGATTAC ATTAACTACA TTACGCCGCA GTTTTCACGC
ACCCACATTA ACTTTCAGCG TGTTCCCACC GTTGATACCT CGAACCCATT TGCCGCCAAA
GCTATTCCCT CGTTAGACGA AAGTTTCGTT GTGATCCATT TCCGTGGTTT GGATCACATC
GATTTCCCTT ATTTGCTGGC GATGTTACAG GGATCATTTA TTTCCAACAT CAATACGTTA
GTGGTACCCG GAGGGAAGAT GGGGCTGGCG ATGGAGTTAA TTATGGCTCC GCTGGTTCAG
CAACTGCTGG AAGGGAAGCA GATCGCTTAA
 
Protein sequence
MSTKHPVIAV TGSSGAGTTT TSLAFRKIFQ QLDIRAAQIE GDSFHRYTRP EMDAAIRKAR 
DQGRHISYFG PEANDFGQLE QSVAEYSKHG TGRSRKYLHT YDEAVPYNQI PGTFTPWEPL
PEPTDVLFYE GLHGGVVTEH HDVAKHVDLL VGVVPIVNLE WIQKLVRDTG ERGHSREAVM
DSVVRSMDDY INYITPQFSR THINFQRVPT VDTSNPFAAK AIPSLDESFV VIHFRGLDHI
DFPYLLAMLQ GSFISNINTL VVPGGKMGLA MELIMAPLVQ QLLEGKQIA