| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3938 |
|---|
| Symbol | tauA |
|---|
| ID | 5385808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4415388 |
|---|
| End bp | 4416431 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640866969 |
|---|
| Product | taurine transporter substrate binding subunit |
|---|
| Protein accession | YP_001402886 |
|---|
| Protein GI | 153948232 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATAA CTTTTTCTTC GGCAACCCTT GCCGCTTCAA GACGCAGCTT TTTACAACTC
CGCACGATTT TATTGGCCTC GTTACTGCCA GCTTCATTAC TGCTCGCCAC CAGCGCGCAG
GCAGTCGATG TCATCGTGGC TTATCAAACC TCTGCTGAAC CGGCAAAGGT CGCGCAGGCA
GATAACAGTT TTGCCAAACT CTCTGGTGCC AACGTGGATT GGCGCAAATT TGATAGCGGT
TCCAGCGTTG TCAGGGCGCT AGCTTCTGGT GATGTGCAGA TTGGTAATAT TGGCTCCAGC
CCACTCGCTG TCGCTGCCAG TCAAAATGTA CCGATTGAAG TTTTCCTTCT GGCCTCACAA
CTGGGTAGCT CTGAAGCCTT GGTGGTGAAA AAAGAGATCA AAACGCCACA GGATTTGATT
GGTAAACGTA TTGCTGTGCC GTTTATTTCT ACCGCCCATT ACAGCTTGCT GGCGGCGTTG
AAGCATTGGG GGATTAAACC GGGCCAAGTC ACCATCCTCA ACTTACAACC CCCGGCTATC
GCCGCCGCCT GGCAGCGTGG TGATATTGAC GGCGCTTATG TTTGGGCACC TGCCGTGAGT
GAATTAGCCA AAACCGGTAC GGTACTCACC GATTCAGCCC AAGTGGGCCA GTGGGGGGCA
CCAACATTGG ATGTATGGGT AGTGCGCAAA GACTTTGCCA AAGCCCATCC TGAAGTTGTT
ACCGCCTTTG CCCGCAGTGC ATTGGCAGCA CAAGCCGCTT ATCTGAACAA CCCTGAACAG
TGGTTGCAAA ATCAAGCGCA TTTAGCCCCA CTCTCTCGCT TGAGTGGTGT GCCCACCGAG
CAAGTTCCAG CGCTGGTAAA AGGCAATACT TACTTGCCAG TGGCTGAACA GATAACGCAA
TTAGGTCAGC CGGTGGATCA GGCTATCCGC GATACTGCAG AGTTCCTTAA GCAGCAAGGC
AAGATCCCTC AAGTTGCCAG TGACTACCGT GATTTTGTCA CTGACCGTTT TGTAAAAGAA
ATCCAGGCGA CACCGCAATC CTAG
|
|---|
| Protein sequence | MAITFSSATL AASRRSFLQL RTILLASLLP ASLLLATSAQ AVDVIVAYQT SAEPAKVAQA
DNSFAKLSGA NVDWRKFDSG SSVVRALASG DVQIGNIGSS PLAVAASQNV PIEVFLLASQ
LGSSEALVVK KEIKTPQDLI GKRIAVPFIS TAHYSLLAAL KHWGIKPGQV TILNLQPPAI
AAAWQRGDID GAYVWAPAVS ELAKTGTVLT DSAQVGQWGA PTLDVWVVRK DFAKAHPEVV
TAFARSALAA QAAYLNNPEQ WLQNQAHLAP LSRLSGVPTE QVPALVKGNT YLPVAEQITQ
LGQPVDQAIR DTAEFLKQQG KIPQVASDYR DFVTDRFVKE IQATPQS
|
|---|
| |