Gene YpsIP31758_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3900 
SymbolrpsH 
ID5387061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4387983 
End bp4388375 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID640866931 
Product30S ribosomal protein S8 
Protein accessionYP_001402848 
Protein GI153947108 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.34775e-12 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCGAT CGCGGATATG CTGACCCGTA TCCGTAACGG TCAAGCCGCA 
AACAAAGTTG CGGTCACCAT GCCCTCCTCC AAGCTGAAAG TGGCAATTGC CAACGTTCTG
AAGGAAGAAG GCTTTATTGA AGATTTTAAA ATCGAAGGCG ACACCAAGCC TGTTCTGGAA
TTAGCACTTA AGTACTTCCA GGGTAAGGCA GTGGTAGAAA GCATTCAACG TATCAGCCGT
CCAGGTCTGC GCATCTATAA GAAAAAAGAT GAGCTGCCAA AAGTTATGGC CGGTTTGGGT
ATCGCTGTTA TTTCTACCTC TAAAGGTGTT ATGACCGATC GTGCAGCTCG CCAAGCTGGT
CTTGGTGGCG AGATTATCTG CTACGTAGCT TAA
 
Protein sequence
MSMQDPIADM LTRIRNGQAA NKVAVTMPSS KLKVAIANVL KEEGFIEDFK IEGDTKPVLE 
LALKYFQGKA VVESIQRISR PGLRIYKKKD ELPKVMAGLG IAVISTSKGV MTDRAARQAG
LGGEIICYVA