Gene YpsIP31758_3893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3893 
SymbolrpsM 
ID5386590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4383941 
End bp4384297 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID640866924 
Product30S ribosomal protein S13 
Protein accessionYP_001402841 
Protein GI153948869 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000123367 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCGTA TAGCAGGCAT TAACATTCCT GATCAGAAAC ATACCGTTAT CGCTTTAACT 
GCGATCTTCG GCATCGGCAA AACTCGCTCA CAGGCTATCT GTGTTGCTGC GGGTATTGCT
GAACATGTTA AGATCAGTGA GCTGTCTGAA GAGCAAATCG AGAAGCTGCG TGACGAAGTT
GCCAAGTACG TTGTAGAAGG TGATCTGCGT CGTGAGGTGA CCCTGAGCAT CAAGCGTCTG
ATGGACCTTG GGACTTATCG TGGTTTGCGT CATCGTCGTG GTCTACCAGT TCGCGGTCAG
CGTACTAAGA CCAACGCACG TACCCGTAAG GGTCCGCGTA AACCGATCAA GAAATAA
 
Protein sequence
MARIAGINIP DQKHTVIALT AIFGIGKTRS QAICVAAGIA EHVKISELSE EQIEKLRDEV 
AKYVVEGDLR REVTLSIKRL MDLGTYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIKK