Gene YpsIP31758_3888 details

Gene Information

• Locus tag: YpsIP31758_3888
• Symbol: zntR
• ID: 5386402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 4380567
• End bp: 4380992
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640866919
• Product: zinc-responsive transcriptional regulator
• Protein accession: YP_001402836
• Protein GI: 153949481
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR02043] Zn(II)-responsive transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.00039361
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAA TCGGGCAGTT AGCTAAACTT GCTGATGTAA CGCCGGATAC TATCCGTTAC 
TACGAAAAGC AGGGAATGAT GGATCACGGT GAACGAACTG ATGGTGGCTA CCGGCTGTAT 
ACTGATCAGG ACCTTCAGCG TTTACGGTTT ATCCGCTACG CCAAGCAACT AGGCTTTACA 
TTGGATACTA TCGCAGAATT ATTGTCGATC CGGATAGATC CTGACCATCA TACCTGCCAG 
GAGTCCAAGT CTATTGTAGA TTCACGGCTT AGTGATGTGG AAGGTAAGAT CAGAGAATTA 
GAGAGAATGC GTGATTCCCT AAAAAGACTC AGCGAGGCTT GTTGTGGCAC TAGTCATGCG 
ACGACATACT GCTCAATATT GGAAGCTTTG GAGCAGGGGG CAACAGAAGA GTTAATTAAG 
GTATGA 

 

Protein sequence

MLKIGQLAKL ADVTPDTIRY YEKQGMMDHG ERTDGGYRLY TDQDLQRLRF IRYAKQLGFT 
LDTIAELLSI RIDPDHHTCQ ESKSIVDSRL SDVEGKIREL ERMRDSLKRL SEACCGTSHA 
TTYCSILEAL EQGATEELIK V