Gene YpsIP31758_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3880 
Symbolsmg 
ID5388108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4373617 
End bp4374090 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID640866911 
Producthypothetical protein 
Protein accessionYP_001402828 
Protein GI153948918 
COG category[S] Function unknown 
COG ID[COG2922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000155024 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACG TTCTAATTTA CTTATTTGAA ACTTACATGC ACAACGAACC GGAAATGCTT 
GTCGATCAGG ACAAGATTAC TGACGATCTT GCTGATGCAG GTTTCTACCG TGAGGATATC
AACAACGCCC TGAACTGGTT AGAGGTCCTC GCTGATCTAC AGGAAGGGCA GAAAGCCCCT
TATCTCTATA CCGCAGATCC ACAAGCTTTA CGTATCTATA CTGTGGAAGA GTGTCGGCGT
CTAGGGGCTG CCTGCCGTGG TTTTATCCTC TTCCTTGAAC AAATTCAGGT ATTACAGTTT
GATACTCGTG AGATGGTGAT TGATCGTATC ATGGCGCTTG ATTCCCCCGA GATTGATCTT
GAAGATCTTA AATGGGTTGT GCTGATGGTG TTATTCAATA TACCGGGTTA TGAAAATGCC
TATAAGCAGA TGGAAGAGCT GCTCTTTGAA GTCAATGACG GTTATTTGCA CTAG
 
Protein sequence
MFDVLIYLFE TYMHNEPEML VDQDKITDDL ADAGFYREDI NNALNWLEVL ADLQEGQKAP 
YLYTADPQAL RIYTVEECRR LGAACRGFIL FLEQIQVLQF DTREMVIDRI MALDSPEIDL
EDLKWVVLMV LFNIPGYENA YKQMEELLFE VNDGYLH