Gene YpsIP31758_3876 details

Gene Information

• Locus tag: YpsIP31758_3876
• ID: 5386741
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 4371036
• End bp: 4371578
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640866907
• Product: hypothetical protein
• Protein accession: YP_001402824
• Protein GI: 153947330
• COG category: [R] General function prediction only
• COG ID: [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0000000917644
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGACT CTATCCGCCC TTATCTTCAT CATTCACCGA CTTTAGGTAA ACGAGTCATG 
ATCGATAGAT CGAGTGTGAT CATTGGCAAT GTTATTTTAG GTGATGATGT CAGTGTCTGG 
CCATTAGTCG CCATTCGTGG CGATGTTAAT CAAGTCATCA TTGGGGCACG TTCAAATATC 
CAAGACGGTA GTGTGCTACA TGTTACCCAC CAATCTGAGC ATAATCCTGA AGGGTATCCG 
TTAATCATTG GTGAAGACGT GACTATTGGT CATAAAGCCA TGCTACACGG CTGTACCATT 
GGTAACAGAG TATTAGTGGG TATGGGATCT ATTCTATTAG ATGGAACAAT AATAGAAGAT 
GATGTAATGA TTGGTGCAGG TAGCCTCATT ACTCCAGGTA AACGCTTAGT TAGTGGCTAT 
CTTTATGTGG GCAGCCCAGC GAAGCAAATA CGCCCATTAA CACCCTTAGA GTTAGAAGGC 
CTGCTTTACT CTGCTGGCAA CTACGTTCGC TGGAAAGATG ACTATCTGGC AGAGTCTAAA 
TAA 

 

Protein sequence

MCDSIRPYLH HSPTLGKRVM IDRSSVIIGN VILGDDVSVW PLVAIRGDVN QVIIGARSNI 
QDGSVLHVTH QSEHNPEGYP LIIGEDVTIG HKAMLHGCTI GNRVLVGMGS ILLDGTIIED 
DVMIGAGSLI TPGKRLVSGY LYVGSPAKQI RPLTPLELEG LLYSAGNYVR WKDDYLAESK