| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3844 |
|---|
| Symbol | purD |
|---|
| ID | 5385221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4331184 |
|---|
| End bp | 4332470 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640866869 |
|---|
| Product | phosphoribosylamine--glycine ligase |
|---|
| Protein accession | YP_001402795 |
|---|
| Protein GI | 153950785 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
|---|
| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.000315171 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTT TGATAATTGG TAACGGCGGT CGTGAACACG CTCTGGGCTG GAAAGCCGCC
CAATCTCCTT TAGCGGACAA AATTTATGTT GCACCAGGTA ATGCGGGTAC AGCACTGGAA
CCGACCTTAG AAAATGTTGA TATCGCCGCC ACTGATATTG CCGGTTTACT GGCCTTTGCT
CAAAGTCATG ATATCGGCCT GACGATTGTT GGCCCAGAAG CCCCTTTGGT GATCGGCGTG
GTTGATGCGT TCCGCGCTGC TGGTTTAGCT ATTTTTGGCC CGACTCAGGC TGCGGCTCAA
TTAGAGGGTT CTAAAGCCTT CACCAAAGAT TTCCTGGCCC GTCACAACAT TCCCTCTGCG
GAATACCAAA ACTTTACAGA TGTCGAGGCC GCATTGGCCT ATGTGCGTCA AAAAGGTGCG
CCAATCGTTA TCAAAGCCGA TGGTCTGGCC GCCGGTAAAG GCGTGATTGT TGCGATGACG
CAGGAAGAAG CCGAAACCGC CGTGAATGAT ATGTTGGCCG GTAACGCTTT TGGTGATGCA
GGGCACCGTA TCGTGGTGGA AGAGTTCCTT GATGGCGAAG AAGCCAGCTT TATCGTGATG
GTTGATGGCG AAAATGTTTT GCCAATGGCG ACCAGTCAGG ATCATAAGCG AGTTGGCGAT
GGTGATACCG GGCCAAATAC CGGCGGAATG GGTGCTTATT CCCCAGCCCC CGTGGTAACA
GATGATGTTC ACCAACGGGT CATGGATCAG GTTATTTGGC CGACCGTGCG TGGTATGGCG
GCGGAAGGTA ATATTTACAC CGGTTTCCTC TATGCTGGCC TGATGATTTC AGCCGATGGG
CAACCCAAAG TCATTGAGTT CAACTGCCGC TTTGGCGATC CAGAAACGCA GCCAATCATG
TTGCGTATGC GCTCCGATTT GGTCGAACTG TGTTTAGCCG GTACACAAGG CAAACTAAAT
GAAAAAACCT CAGACTGGGA TGAGCGCCCA TCACTGGGGG TCGTTTTAGC CGCTGGCGGT
TATCCAGCAG ATTACCGCCA GGGTGATGTT ATTCATGGCT TACCACAGCA AGAAGTCAAG
GATGGAAAAG TCTTCCACGC GGGGACCAAG CTGAATGGGA ATCATGAAGT TGTCACCAAT
GGTGGCCGCG TCTTGTGTGT CACTGCACTC GGTGAAACCG TCGCGCAGGC GCAACAATAT
GCCTATCAGT TAGCTGAGGG GATCCAGTGG GAAGGGGTTT TCTGCCGTAA AGATATTGGT
TATCGAGCGA TTGCTCGCGG TAAGTAA
|
|---|
| Protein sequence | MNILIIGNGG REHALGWKAA QSPLADKIYV APGNAGTALE PTLENVDIAA TDIAGLLAFA
QSHDIGLTIV GPEAPLVIGV VDAFRAAGLA IFGPTQAAAQ LEGSKAFTKD FLARHNIPSA
EYQNFTDVEA ALAYVRQKGA PIVIKADGLA AGKGVIVAMT QEEAETAVND MLAGNAFGDA
GHRIVVEEFL DGEEASFIVM VDGENVLPMA TSQDHKRVGD GDTGPNTGGM GAYSPAPVVT
DDVHQRVMDQ VIWPTVRGMA AEGNIYTGFL YAGLMISADG QPKVIEFNCR FGDPETQPIM
LRMRSDLVEL CLAGTQGKLN EKTSDWDERP SLGVVLAAGG YPADYRQGDV IHGLPQQEVK
DGKVFHAGTK LNGNHEVVTN GGRVLCVTAL GETVAQAQQY AYQLAEGIQW EGVFCRKDIG
YRAIARGK
|
|---|
| |