| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3837 |
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| Symbol | actP |
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| ID | 5386170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4319824 |
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| End bp | 4321479 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866861 |
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| Product | acetate permease |
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| Protein accession | YP_001402791 |
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| Protein GI | 153949534 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0353587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC GCCATTGGTC TGCACTTTCT TTATTCGTTT TGCCTGCGCT AGCACAGGCG
GAAGCACTTA CCGGCGAGGT CCACCGCCAA CCCCTCAATA TTCAGGCGAT CGTCATGTTT
TTGCTGTTTG TTGGCGGAAC CTTGTATATC ACCTATTGGG CATCAAAACG TACTCGCTCC
CGGCAAGATT ATTACACGGC TGGCGGGCGA ATTACTGGCT TTCAAAATGG TTTAGCCATC
GCTGGGGATT ATATGTCTGC AGCATCATTC CTTGGTATTT CAGCCTTGGT TTATGCTTCC
GGTTACGACG GTTTAATTTA CTCCATCGGC TTCTTAATCG GCTGGCCCAT TATTCTATTT
TTAATTGCTG AACGCCTGCG TAATTTGGGC CGTTATACCT TTGCCGATGT TGCCTCTTAC
CGCTTGCAAC AAAGACCCAT ACGCACATTA TCAGCCTGTG GTTCGTTAGT CGTTGTCGCC
CTGTATTTGA TCGCTCAGAT GGTGGGGGCA GGTAAACTCA TTCAACTTTT ATTTGGTTTG
AACTACCACG TCGCTGTCGT GTTGGTTGGT ATCCTGATGG TGCTGTACGT CCTGTTCGGC
GGTATGTTAG CAACCACTTG GGTACAGATA ATCAAAGCGG TCATGCTACT GTCTGGTGCC
ACATTTATGG CTATTATGGT CATGAAATCA GTTAATTTTA ACTTCAATAC GTTATTCAGT
GAGGCGGTTA AAGTTCATCC CAAAGGCCTT AGCATCATGA GCCCAGGAGG GTTGGTATCT
GACCCGATAT CAGCATTATC TCTTGGTTTG GCCCTCATGT TTGGCACTGC TGGCTTACCT
CATATCCTGA TGCGCTTCTT TACCGTAAGC GATGCCAAAG AAGCACGTAA AAGCGTGTTC
TATGCCACAG GTTTTATAGG CTACTTCTAC ATATTGACCT TTATTATTGG ATTCGGCGCG
ATCTTACTCG TCGGTCCAAA CCAGACATTT AAAGATGCGG CTGGCGCATT ACTGGGTGGT
AACAATATGG CTGCGGTCCA TTTGGCTAAT GCTGTCGGGG GGAGCTTCTT CTTAGGCTTT
ATCTCAGCGG TTGCCTTCGC AACCATTTTG GCTGTAGTGG CTGGCTTGAC ATTAGCCGGT
GCATCGGCGG TATCTCATGA TCTCTATGCC AGCGTCATTA AGAAAGGCAA AGCCAATGAA
CGCGATGAAT TGAGAGTCTC CAAAATTACG GTAATCATCT TAGGTATCGT CGCTATTGGT
TTGGGGATTT TGTTTGAAAA ACAGAATATT GCCTTTATGG TCGGGTTGGC ATTCTCCATT
GCAGCCAGTT GTAACTTCCC AATTATTATC ATCTCAATGT ATTGGGATAA ACTGACAACC
CGTGGAGCAA TGATCGGTGG GTGGCTCGGG TTATCAACGG CAGTGATCCT GATGATTTTA
GGCCCTACGA TCTGGGTAAC AATCCTTGGT CATGAAAAGC CAATCTATCC GTATGAGTAC
CCTGCATTGT TTTCAATGAT AGCGGCGTTC ATCGGTACCT GGTTCTTCTC AATCACGGAT
AACTCAGAAA CCGGCAAACA GGAACGGTTA CTATTCAAAT CACAGTTTGT CCGTTCACAA
ACCGGCTTGG GGGCATCTAA AGGCGGTGCT CACTGA
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| Protein sequence | MKIRHWSALS LFVLPALAQA EALTGEVHRQ PLNIQAIVMF LLFVGGTLYI TYWASKRTRS
RQDYYTAGGR ITGFQNGLAI AGDYMSAASF LGISALVYAS GYDGLIYSIG FLIGWPIILF
LIAERLRNLG RYTFADVASY RLQQRPIRTL SACGSLVVVA LYLIAQMVGA GKLIQLLFGL
NYHVAVVLVG ILMVLYVLFG GMLATTWVQI IKAVMLLSGA TFMAIMVMKS VNFNFNTLFS
EAVKVHPKGL SIMSPGGLVS DPISALSLGL ALMFGTAGLP HILMRFFTVS DAKEARKSVF
YATGFIGYFY ILTFIIGFGA ILLVGPNQTF KDAAGALLGG NNMAAVHLAN AVGGSFFLGF
ISAVAFATIL AVVAGLTLAG ASAVSHDLYA SVIKKGKANE RDELRVSKIT VIILGIVAIG
LGILFEKQNI AFMVGLAFSI AASCNFPIII ISMYWDKLTT RGAMIGGWLG LSTAVILMIL
GPTIWVTILG HEKPIYPYEY PALFSMIAAF IGTWFFSITD NSETGKQERL LFKSQFVRSQ
TGLGASKGGA H
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