Gene YpsIP31758_3803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3803 
SymbolhmuT 
ID5385464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4288297 
End bp4289136 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content53% 
IMG OID640866827 
Producthemin ABC transporter, periplasmic hemin-binding protein 
Protein accessionYP_001402757 
Protein GI153950610 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.656087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTCC GGTTGCTGTC GCTCCCCTTC ATTCTGTCGC TCTGTGCCCC TCTGCTGCCA 
CTAAATACCT TGGCGGCAGA ACGTATTGTG ACTATTGGTG GAGATGTAAC AGAAATTGCC
TATGCACTCG GTGCAGGTGA TGAGATTGTG GCCCGTGACA GCACCAGTCA ACAGCCTCAG
GCAGCGCAAA AGCTGCCTGA TGTTGGTTAT ATGCGTACGC TGAACGCGGA AGGTATTTTG
GCGATGAAGC CAACCATGTT GCTGGTTAGT GAACTGGCTC AGCCCTCACT GGTGCTGACG
CAGATCGCCA GCAGCGGTGT GAATGTAGTG ACGGTACCAG GCCAGACGAC ACCTGAAAGC
GTCGCGATGA AGATTAATGC CGTTGCCACG GCACTTCATC AGACGGAGAA AGGGCAGAAA
CTGATCGAAG ACTACCAACA GCGCTTGGCC GCCGTGAACA AGACTCCACT GCCAGTGAAA
GTGCTGTTTG TCATGAGCCA TGGCGGGTTA ACACCGATGG CTGCGGGCCA AAATACGGCG
GCAGATGCCA TGATCCGTGC GGCGGGTGGC AGTAATGCGA TGCAGGGCTT TAGCCGTTAT
CGCCCGCTGT CGCAGGAAGG GGTTATCGCC AGTGCGCCAG ATTTATTATT GATCACCACG
GATGGTGTTA AAGCGCTGGG TAGCAGTGAA AATATCTGGA AATTACCGGG TATGGCACTG
ACTCCGGCTG GCAAACATAA ACGCCTGTTG GTCGTGGATG ATATGGCATT ACTTGGCTTT
GGTCTGGAAA CACCACAAGT GCTTGCACAG CTACGTGAAA AAATGGAACA GATGCAATGA
 
Protein sequence
MRLRLLSLPF ILSLCAPLLP LNTLAAERIV TIGGDVTEIA YALGAGDEIV ARDSTSQQPQ 
AAQKLPDVGY MRTLNAEGIL AMKPTMLLVS ELAQPSLVLT QIASSGVNVV TVPGQTTPES
VAMKINAVAT ALHQTEKGQK LIEDYQQRLA AVNKTPLPVK VLFVMSHGGL TPMAAGQNTA
ADAMIRAAGG SNAMQGFSRY RPLSQEGVIA SAPDLLLITT DGVKALGSSE NIWKLPGMAL
TPAGKHKRLL VVDDMALLGF GLETPQVLAQ LREKMEQMQ