| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3718 |
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| Symbol | |
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| ID | 5384320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4195489 |
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| End bp | 4197609 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640866742 |
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| Product | hypothetical protein |
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| Protein accession | YP_001402672 |
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| Protein GI | 153949357 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.387295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA AATATGTGAT GGAATCCCTG TTGCGTCCCG CCGTCGAATT GTACACGGCA
GCCACGGCGT GGAGCGCCGT TTACATTTGC CTGACGGCAC CCTGGGCGGT GGCATTGGCA
CCGTCTGTTA GTTGGGTGAC GGCGGCGGGC TTTAGTGTTT TTGCTTTGAA ACGAACCCAC
CAAGGGCTGC GTATTCTGCG CTACCGGCGC AACATCCGGC GGCTGCCCCG TTATGCAATG
AGTAGCCGAC ACATCCCCAT TAGTCACCGA TATCTGTTTC TGGGGCGCGG GTTTCAGTGG
ACACAAAAAC ACACGCAGCG GCTGCTGGAA GCGCGTCATC CAGAGACCGA ACATTATGTG
CAGCCATCGG TTATCTATCG TATGGCTCGG GATTTGGAGA AACGTCTGGA ATCCCGCTTG
CCATGGTTGT GTCGGCTGAC GCAGGCCGAT ACGGGTTTAA ATCCGGTAAG ACCGCTGCCG
CCCGTCGGGG GCAGCCCAAT CTATCACGGT GTTGAATTAA ATGAACGTGA CGTTCTGTAT
GACTTGGGAG ACCGTGTCGG CCACACGCTG GTTATCGGAA CCACCCGCGT GGGGAAAACT
CGTTTAGCAG AGGTGCTGGT CACGCAAGAT ATTCGTCGCG GGGACGTGAC CGTCATGTTC
GATCCTAAAG GGGATGCCGA TCTGCTTAAA CGTATGTGGG CGGAAACGCG TAGAGCGGGG
AGGGAGAATG AGTTTTACGT ATTCCATCTG GGCTGGCCAG ATATCAGCGC CCGTTACAAC
GCCATAGGTC GCTTCAGCCG TATCTCTGAA GTCGCTTCAC GCGTGGCCGG GCAATTATCC
GGTGAAGGTA ATTCAGCCGC GTTTCGTGAA TTCGCCTGGC GCTTTGTGAA CATCATTACC
CGCGCATTAG TCGCCCTTGG GCAGCGCCCT GATTACGGGC TCATCCTGCG TTATGTGACC
AATATTGGCG AACTTTATGA GACTTATGTA GAAAACCTGC TGACAGTACA AGCCCCTCAG
CTCTGGCTGA ATGTTCAGAA CGTGATCAGT TCGAACATGC TGAAAGAGCG TGATCTTCCC
CGAAATATGC AGGGCCAGGC CAATGCCATG AAAGTGTGGG CGATCGAGAC GGTACTCAGC
AGTGATGCCG GCAAGAAATT GTGGGATCCA GTGCTGGATG GTCTACGCAG TGCGGTTCGT
TATGATCGTA CCTATTTTGA CAAGATCGTG GCTTCGTTAC TGCCACTGTT GGAAAAGCTC
ACTACCGGTA AAACCGCGGC TCTGCTGGCA CCTGATTACA ATGATATGAA AGATACGCGG
CCAATTTTTG ACTGGCAGGA AGTGATCCGT AAAAAGGGGA TTGTGTATGT CGGTCTCGAT
GCACTGTCTG ATCCTGAAGT GGCGTCGGCG GTGGGCAACA GTATGTTTGC TGATCTGGTC
TCAGTTGCGG GCCATATCTA CAAATTTGGC ATCAGTGATG AAATTGGCGC TAAAACGCAG
AAGAAAGTGC CGATTAACCT GCATTGCGAC GAGTTCAACG AGTTGATGGG GGATGAGTTC
ATCCCATTAA TTAACAAAGG GGGCGGGGCA GGTATCCAGG TGACGGCGTA CACTCAGACG
CTTTCAGACA TTGAAGCGCG AGTGGGCAGT AGTGCTAAAG CGAAGCAGGT TGTTGGTAAT
TTCAACTCCC TGATTATGCT AAGGGTACGT GAAAACAGCA CCGCCGAACT GCTGACCAGC
CAACTGCCGG AAGTTGATGT TTATACTAAA ACGCTGGTCT CTGGCGTAAC GGATATGGCT
AACCCTGAGC AGGATTCTGA TTTCACCAGT AATGTACAAG ACCGTGTGAG TAGCATCCGT
ATGCCCATGG TCACGCCAGC AGATATTATC AACCTGCCCA AAGGTCAGGC GTTTGCACTG
CTCGAAGGTG GGCAACTGTG GAAGGTCAGA ATGCCTCTTC CTGATGGTAG CAATGATCCG
TTGATGCCGG AAAGTATCAG CCGGATAGTC GAATACATGC AGCAGAATTA CCGTACTGGG
GAAAATTGGT GGTTGGGGAG TGCGCTACCG TCCGATATTT TGGCCGCGTC AGATTTTAGT
CAAGGGGACG CTGAAAATTA A
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| Protein sequence | MSDKYVMESL LRPAVELYTA ATAWSAVYIC LTAPWAVALA PSVSWVTAAG FSVFALKRTH
QGLRILRYRR NIRRLPRYAM SSRHIPISHR YLFLGRGFQW TQKHTQRLLE ARHPETEHYV
QPSVIYRMAR DLEKRLESRL PWLCRLTQAD TGLNPVRPLP PVGGSPIYHG VELNERDVLY
DLGDRVGHTL VIGTTRVGKT RLAEVLVTQD IRRGDVTVMF DPKGDADLLK RMWAETRRAG
RENEFYVFHL GWPDISARYN AIGRFSRISE VASRVAGQLS GEGNSAAFRE FAWRFVNIIT
RALVALGQRP DYGLILRYVT NIGELYETYV ENLLTVQAPQ LWLNVQNVIS SNMLKERDLP
RNMQGQANAM KVWAIETVLS SDAGKKLWDP VLDGLRSAVR YDRTYFDKIV ASLLPLLEKL
TTGKTAALLA PDYNDMKDTR PIFDWQEVIR KKGIVYVGLD ALSDPEVASA VGNSMFADLV
SVAGHIYKFG ISDEIGAKTQ KKVPINLHCD EFNELMGDEF IPLINKGGGA GIQVTAYTQT
LSDIEARVGS SAKAKQVVGN FNSLIMLRVR ENSTAELLTS QLPEVDVYTK TLVSGVTDMA
NPEQDSDFTS NVQDRVSSIR MPMVTPADII NLPKGQAFAL LEGGQLWKVR MPLPDGSNDP
LMPESISRIV EYMQQNYRTG ENWWLGSALP SDILAASDFS QGDAEN
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