Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3681 |
Symbol | dipZ |
ID | 5387978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4149430 |
End bp | 4151217 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866704 |
Product | thiol:disulfide interchange protein precursor |
Protein accession | YP_001402635 |
Protein GI | 153946977 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.576987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCAAC GCTTCATTAC TCTGATCCTG CTGCTGTGCA GCGTATTACT CGCCCCGCAC AGCGCCCAGT CCTCACTCTT TGGTGAGAAT ACCTCTTTTG GTGCCAAAAA CAGTCAGAGC CGGTTTATTC CGGTCGATCA AGCGTTCGCC TTTGATTTCC ACCAGCAAGG CGATCAGCTG AATCTGAGTT GGCAAATCCA TCCCGGTTAC TACCTGTATC GCCAGCAAAT AAAAATTGTA CCGCAGCAAG CGGCTCTGGG AGCATTCACC CTGCCGGAAG GCATTACGCA TCATGATGAG TTCTATGGTG AAGTCGAGAT TTTCAAGCAG CAGTTAACCC TGAAAATCCC CATTACTCAG GCGGCTGAAC AGGCTAGCGT CAGTGTGACC TATCAGGGCT GTGCGGAAGC AGGCTTCTGT TATCCACCAG AAACGCGGGT GATCCCACTT GATGTGGTCG TTGCTGCTTC CACGGCTTCA GGCACTGCTG CCGTCAATTC GTCCGCTACC GTCAATCCAC CAGCGACAAC ACAGCCAGAG GGCGATGCCA CACCAGTACC GTCTACGTTA CCCTTCTCTC CCTTGTGGGC GCTGCTAATC GGTATCGGGA TTGCGTTTAC CCCCTGTGTT TTACCGATGT ATCCATTGAT TTCAGCCGTC ATTCTTGGCC GTGAAAAACC ACACAGCCAA CGGCGAATAC TGATATTAGC GGTGGTGTAC GTACAAGGGA TGGCGCTGAC CTATACCTTG CTAGGGTTAG TGGTTGCGGC GGCAGGTTTA CAATTCCAGG CCGCGCTACA GCATCCTTAT GTGTTGATTG GCTTGTCGGT ATTATTCGTG CTGTTGGCAT TATCAATGTT CGGCCTGTAT TCATTGCAAT TACCTTCATC GTTACAGACC CGCCTGACAC AGTGGAGTAA TAGCCAACGT GGCGGCTCAC TGGCCGGTGT ATTTGCGATG GGTGCACTGG CGGGTCTGAT TTGTTCTCCC TGCACTACCG CACCGCTGAG CGCGATCCTG CTCTATATTG CCCAAAGCGG TAATATGCTG GCCGGTGGTG GGACCTTGTA CCTATATGCG CTTGGGATGG GGATCCCGCT AGTGGTTGTC ACCCTGTTCG GCAACAAGCT CATTCCACGC AGCGGTCCGT GGATGCAATA TGTCAAAGAG GCTTTTGGTT TTGTGATCCT GGCGCTGCCC GTGTTTTTAC TGGAAAGGGT GCTGGGGGAT GTCTGGGGTT TACGTTTATG GAGCCTGCTG GCCGTCGCGT TCTTTGGCTG GGCGTTTGTA TTGAGCCTGA AAGCGCACGC TGGTTGGGTG CGGGTCTGCC AGTTATTGCT CTTGGCCGCA CTGTTGATCG TGGCTCGCCC CTTGCAAGAT TGGGCCTTTA ACGGCAACAC GCAGCAGAAC GCAGTCAAGC ATATAAACTT TCAACCAGTG GCTAATTTAC CCCAATTGCA AGCCGTATTA GCGCAGGCGC AGGGTAAACC GGTGATGCTC GATCTGTATG CAGACTGGTG TGTGGCCTGT AAAGAGTTTG AGAAATACAC TTTCAGTGAT GATAAGGTCC AGCGCCAGTT AGCCAATACC CTGTTGCTGC AAGCGGATGT CACCGCCAAC AATGCTGAAC ATGCCACATT ATTGAAGAAA TTTAACGTGT TAGGTTTACC CACTATTCTG TTTTTTGATT CTCAGGGCAA CGAGATCACT GCCGCACGGG TCACCGGGTT TATGGACGCT GCGCAATTCT TACAGCATTT ACAAAACACC CCCGCGGTTA CAAAATAA
|
Protein sequence | MAQRFITLIL LLCSVLLAPH SAQSSLFGEN TSFGAKNSQS RFIPVDQAFA FDFHQQGDQL NLSWQIHPGY YLYRQQIKIV PQQAALGAFT LPEGITHHDE FYGEVEIFKQ QLTLKIPITQ AAEQASVSVT YQGCAEAGFC YPPETRVIPL DVVVAASTAS GTAAVNSSAT VNPPATTQPE GDATPVPSTL PFSPLWALLI GIGIAFTPCV LPMYPLISAV ILGREKPHSQ RRILILAVVY VQGMALTYTL LGLVVAAAGL QFQAALQHPY VLIGLSVLFV LLALSMFGLY SLQLPSSLQT RLTQWSNSQR GGSLAGVFAM GALAGLICSP CTTAPLSAIL LYIAQSGNML AGGGTLYLYA LGMGIPLVVV TLFGNKLIPR SGPWMQYVKE AFGFVILALP VFLLERVLGD VWGLRLWSLL AVAFFGWAFV LSLKAHAGWV RVCQLLLLAA LLIVARPLQD WAFNGNTQQN AVKHINFQPV ANLPQLQAVL AQAQGKPVML DLYADWCVAC KEFEKYTFSD DKVQRQLANT LLLQADVTAN NAEHATLLKK FNVLGLPTIL FFDSQGNEIT AARVTGFMDA AQFLQHLQNT PAVTK
|
| |