| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3597 |
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| Symbol | nusA |
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| ID | 5384459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4062366 |
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| End bp | 4063853 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866615 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001402551 |
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| Protein GI | 153947426 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000179276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG AGATTCTGGC TGTTGTAGAA GCAGTTTCCA ATGAGAAATC CCTTCCGCGC
GAGAAGATTT TTGAGGCGTT GGAAACCGCT CTAGCGACAG CAACCAAGAA AAAATACGAA
CAAGAGATTG AAGTCCGCGT CAGTATTGAC CGTAAAACCG GTGATTTTGA TACTTTCCGC
CGTTGGGTCG CTGTTGACGA AGTGACTATG CCAACCCGTG AAATCACGTT GGATGCGGCT
CAATTTGAAG ATCCTTCTCT CCAATTGGGT GATTATGTCG AAGACCAGAT TGAATCTGTG
ACTTTTGACC GCATTACCAC CCAAACAGCC AAGCAAGTCA TCGTACAAAA AGTACGTGAA
GCTGAACGGG CGATGGTTGT TGAGCAGTTC CGTCAATATC TGGGGCAAAT TGTCACTGGT
ATTGTTAAGA AAGTTAGCCG TGACAGTATT GCACTGGATC TGGGCCACAA TGCGGAAGCT
GTTATTGGTC GTGAAGATAT GCTCCCGCGT GAAAATTTCC GCCCAGGTGA CCGTATCCGT
GGTGTTCTGT ATGACGTACG TCCAGAAGCT CGTGGCGCAC AGTTGTTTGT CAGCCGTTCA
CGTTCTGAAA TGTTGGTCGA ACTGTTCCGC ATTGAAGTAC CAGAAATTGG TGAAGAGCTG
ATCGAAATTA AAGCCGCTGC CCGTGATCCT GGCTCTCGTG CTAAAATTGC GGTCAAAACC
AATGACAAGC GTATCGATCC GGTTGGTGCT TGCGTTGGTA TGCGTGGTGC CCGTGTTCAG
GCTGTGTCCA GCGAGCTTGG CGGCGAGCGC ATTGATATTG TATTGTGGGA TGATAATCCA
GCCCAGTTTG TTATTAACGC TATGGCGCCA GCTGATGTTG CGTCTATTGT GGTTGATGAA
GACAAACACA CGATGGATGT TGCCGTTGAA GCCAGTAATT TGGCCCAGGC AATTGGTCGT
AATGGCCAGA ACGTACGTTT AGCCGCGCAG CTTAGTGGCT GGGAACTGAA CGTAATGACG
GCGGACGATC TTCAGGCGAA GCATCAGGCC GAGGCTCATG CCGCTATTGA TACCTTCACT
AAATATCTTG ATATCGATGA AGACTTTGCC ACCGTATTGG TAGAAGAAGG TTTCTCTTCT
CTGGAAGAGT TGGCTTATGT GCCAATGAAA GAACTTCTGG AAATCGATGG TCTTGACGAA
GATACGGTTG AAGCGCTGCG TGATCGCGCC AAAGCTGCAT TGACCACGCT GGCCCTGGCA
CAAGAAGAAA GTTTTGGCGA CCAGAAACCC GCTGATGACC TGTTGAATTT AGCGGGTCTG
GAACGTAGCA TGGCATTCAA ATTGGCTGCG CGCGGTGTAT GTACGCTGGA AGATCTTGCC
GAGCAGGGTA TCGACGATTT GGCAGATATT GAAGGGCTTA GCGATGAGCA AGCCGGTGAG
CTGATTATGG CCGCACGTAA TATCTGTTGG TTTGGCGATA ATGCGTAA
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| Protein sequence | MNKEILAVVE AVSNEKSLPR EKIFEALETA LATATKKKYE QEIEVRVSID RKTGDFDTFR
RWVAVDEVTM PTREITLDAA QFEDPSLQLG DYVEDQIESV TFDRITTQTA KQVIVQKVRE
AERAMVVEQF RQYLGQIVTG IVKKVSRDSI ALDLGHNAEA VIGREDMLPR ENFRPGDRIR
GVLYDVRPEA RGAQLFVSRS RSEMLVELFR IEVPEIGEEL IEIKAAARDP GSRAKIAVKT
NDKRIDPVGA CVGMRGARVQ AVSSELGGER IDIVLWDDNP AQFVINAMAP ADVASIVVDE
DKHTMDVAVE ASNLAQAIGR NGQNVRLAAQ LSGWELNVMT ADDLQAKHQA EAHAAIDTFT
KYLDIDEDFA TVLVEEGFSS LEELAYVPMK ELLEIDGLDE DTVEALRDRA KAALTTLALA
QEESFGDQKP ADDLLNLAGL ERSMAFKLAA RGVCTLEDLA EQGIDDLADI EGLSDEQAGE
LIMAARNICW FGDNA
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