Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3594 |
Symbol | truB |
ID | 5384540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4058213 |
End bp | 4059187 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640866612 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001402548 |
Protein GI | 153949353 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0311816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCGTC CACGTCGTCG CGGCCGTGAC ATTAACGGCG TTTTGCTATT GGATAAGCCG CTAGGCCTCT CTTCTAATGA CGTTTTGCAA AAAGTAAAAC GTCTCTTTAG CGCTAATCGC GCTGGTCACA CGGGTGCTCT TGATCCATTA GCAACCGGTA TGTTGCCTAT TTGTCTGGGC GAAGCGACTA AGTTTTCTCA ATTCTTACTC GATTCAGATA AACGTTACCG AGTGGTTGCT CGGCTGGGGC AACGCACGGA TACCTCAGAT GCGGAAGGTG CGTTAATCAG TGAGCGTGAG GTCAATCTTA CTCAAGCTCA GATCGATACT GCACTGGAGA GTTTCCGCGG TGAAAGCCAG CAGATCCCCT CCATGTATTC TGCATTGAAA CATCAAGGTA AGCCTCTTTA CGAATATGCC CGTCAGGGGA TTGAAGTCGA ACGTGAAGCT CGCAGCATTA CGGTTTACGA GTTGCTCTTC ATCCGTTGGG AAGGCAATGA TCTGGAACTG GAAATTCACT GTTCGAAAGG AACGTACATT CGTACCATCA TCGATGACTT GGGTGAATTA TTGGGTTGCG GCGCACATGT CAGTTATCTG CGTCGCTTGC AGGTTGCGAC TTACCCGAGC GAACGGATGG TGACCCTAGA GCAGTTAACG GCGATGGTTG AGGCTGCGCA GGCAGAGGGA CGCTCGCCAA ATCCAGAACT GGATTCGCTG TTATTGCCGA TGGACAGTGC CGTTCTTAAT TTTCCTGAAG TCAATCTGTT ACCTTCCGTG GCCGCTTATG TAAAACAGGG GCAACCGGTG CATGTGTCAG GTGCTCCCAG TGAAGGAATG GTCCGAATCA CTGAAGGTAA AGAGCGTAAT TTCATTGGTA TTGGTACTAT CGCAGAAGAT GGCCGCGTTG CCCCTAAACG TTTGGTTGTG GAAAGCGTGG AAGTAGAAAA TCTGCCAGTA GAAAATAAAA AGTAG
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Protein sequence | MGRPRRRGRD INGVLLLDKP LGLSSNDVLQ KVKRLFSANR AGHTGALDPL ATGMLPICLG EATKFSQFLL DSDKRYRVVA RLGQRTDTSD AEGALISERE VNLTQAQIDT ALESFRGESQ QIPSMYSALK HQGKPLYEYA RQGIEVEREA RSITVYELLF IRWEGNDLEL EIHCSKGTYI RTIIDDLGEL LGCGAHVSYL RRLQVATYPS ERMVTLEQLT AMVEAAQAEG RSPNPELDSL LLPMDSAVLN FPEVNLLPSV AAYVKQGQPV HVSGAPSEGM VRITEGKERN FIGIGTIAED GRVAPKRLVV ESVEVENLPV ENKK
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