| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3578 |
|---|
| Symbol | |
|---|
| ID | 5387119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4039975 |
|---|
| End bp | 4040262 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640866594 |
|---|
| Product | GIY-YIG nuclease superfamily protein |
|---|
| Protein accession | YP_001402532 |
|---|
| Protein GI | 153947761 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2827] Predicted endonuclease containing a URI domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA GCCTTTGGCA TCTCTATTTG CTGCGTACCG CCAGTGGCAT GCTCTATACC
GGTATTACCA CCGATGTAGC ACGGCGGTTG GCACAGCATC AGGCGGGGAA AGGGGCAAAA
GCGCTGCGGG GCAAAGGGGA GTTAACGTTG GTATTTCATT GTGAAGCGGG CGACCGTTCG
ACCGCCTTAA AGCTGGAGTA CCGCGTCAAG CAGCTCAGTA AACAGCAAAA AGAAAAGCTG
GTGATTGACC AGCCGAGGTT ATTGACAACG CTATTTTTAG ACTCGTGA
|
|---|
| Protein sequence | MSDSLWHLYL LRTASGMLYT GITTDVARRL AQHQAGKGAK ALRGKGELTL VFHCEAGDRS
TALKLEYRVK QLSKQQKEKL VIDQPRLLTT LFLDS
|
|---|
| |