| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3556 |
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| Symbol | nrdD |
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| ID | 5385184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4017827 |
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| End bp | 4019965 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866572 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001402510 |
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| Protein GI | 153949602 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAACAG TAGTGATTAA ACGGGACGGC TGCCAGGTAC CTTTTGATGA AGTTCGTATC
AAAGAGGCTG TTGAGCGCGC AGCATTAGCT GTTGGCGTGG TCGATGCCGA TTATTGTGCA
ACCGTTGCCC GAGTGGTCGC TCAAACGATG GAAAACCAGC CGAAGGTTGA TATCCGTGAA
ATTCAAAACG CGGTAGAAAA CCAACTGATG GCGGGTCAAT ACAAACAGTT AGCCCGGGCT
TACATCGAAT ATCGTCATGA TCGTGATATC TCACGGGAAC TGCGTGGCCG CTTGAATCAG
GAAATTCAAG GGTTAGTGGA GCAAAGCAAC AAAGCACTGC TGAACGAAAA TGCCAACAAA
GACAGCAAAG TGATCCCTAC CCAGCGCGAT CTGTTGGCCG GTATTGTTGC CAAGCACTAC
GCTAAACAGC ATCTTTTGCC CCGCGATGTG GTGCTGGCCC ATGAGCGCGG CGAAATTCAC
TATCATGATC TGGATTACGC GCCGTTCTTC CCGATGTTCA ACTGTATGTT GATTGATTTG
GAAGGCATGT TAACCCAAGG TTTTAAAATG GGTAATGCGG AAATAGAGCC GCCAAAATCC
ATTTCTACCG CAACCGCTGT AACCGCACAA ATTATCGCGC AGGTTGCCAG CCATATCTAT
GGTGGCACCA CCATTAACCG TATTGATGAA GTTTTGGCCC CTTTTGTCAC GGAAAGCTTT
AATAAACATA AGGCTGTCGC CGAAGAGTGG CAGATCCCTG ATGTTGCAGG TTATGCCATG
TCGCGTACCG AAAAAGAGTG TTACGACGCC TTCCAGTCAC TGGAGTATGA GGTCAATACA
CTGCATACCG CGAATGGCCA AACGCCCTTC GTCACCTTCG GTTTTGGCTT GGGCACCAGT
TGGCAATCAC GCATGATCCA GCAGGCTATT TTGCGTAATC GTATTGCGGG CTTGGGTAAA
AACCGTAAAA CGGCGGTATT CCCAAAACTG GTATTTGCTA TCCGCGATGG CCTGAACCAC
AAATTTGGCG ATGCTAACTA CGATATCAAA CAGTTGGCGC TGGAGTGCGC AACCAAGCGC
ATGTATCCAG ATATTCTTAA TTATGATCAA GTGGTTAAGG TCACTGGCTC CTTTAAAACG
CCAATGGGCT GCCGTAGCTT CCTCGGCGTG TATGAGGAGG AGGGTCAACA AATCCACGAT
GGCCGGAATA ATTTGGGAGT GATCAGCCTT AATCTGCCAC GTATCGCGTT GGAAGCAAAA
GGGGATGAAA ACCAATTTTG GCAGTTGCTG GATGAGCGCC TGCTTATCGC GAAAAAAGCG
CTAATGACCC GAATTGCCCG TTTAGAAGGG ATCAAAGCAC GAGTCGCCCC CATTCTGTAT
ATGGAAGGTG CTTGCGGTGT ACGCTTACAA GCGGATGATA ATATTGCCGA AATCTTTAAA
AATGGCCGTG CGTCGATCTC GCTGGGCTAT ATCGGGATAC ATGAAACCAT TAATGCCTTA
TTCGGCCATC AGACCCATCT CTTTGATGAC CAGAAGCTGC GCGAAAAAGC CATCGCCATT
GTGGCTCATT TGAAACAGGC TACCGATGAT TGGAAAGATG AAACCGGTTA TGCCTTTAGC
CTATACAGCA CCCCAAGTGA AAACTTGTGT GACCGCTTCT GCCGCCTTGA TACCGCTGAA
TTTGGCGTGG TTGAAGGGGT GACGGACAAA GGCTATTACA CCAACAGCTT CCATCTGGAT
GTTGAGAAAA AAGTGAATCC CTACGACAAA CTGGATTTCG AAGCCCCTTA TCCGCCGCTG
GCTAACGGTG GTTTCATCTG TTACGGCGAA TACCCTAATT TGCAGCACAA CATCCGGGCG
CTGGAAGACG TCTGGGATTA CAGCTACAGC CGGGTTCCTT ATTACGGCAC CAACACGCCA
ATTGATGAGT GCTATGAATG CGGCTTCACC GGTGAATTCT CTTGTACCAG CAAAGGCTTT
ACCTGCCCGA AATGCGGCAA CCATGAGCCA TCGAAAGTGT CGGTCACCCG CCGGGTATGT
GGTTATCTGG GTAGCCCAGA TGCACGGCCA TTTAATGCGG GTAAACAAGA AGAGGTGAAA
CGCCGGGTGA AACATCTGGC TAACGGGCAG TTGGGCTGA
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| Protein sequence | MKTVVIKRDG CQVPFDEVRI KEAVERAALA VGVVDADYCA TVARVVAQTM ENQPKVDIRE
IQNAVENQLM AGQYKQLARA YIEYRHDRDI SRELRGRLNQ EIQGLVEQSN KALLNENANK
DSKVIPTQRD LLAGIVAKHY AKQHLLPRDV VLAHERGEIH YHDLDYAPFF PMFNCMLIDL
EGMLTQGFKM GNAEIEPPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLAPFVTESF
NKHKAVAEEW QIPDVAGYAM SRTEKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS
WQSRMIQQAI LRNRIAGLGK NRKTAVFPKL VFAIRDGLNH KFGDANYDIK QLALECATKR
MYPDILNYDQ VVKVTGSFKT PMGCRSFLGV YEEEGQQIHD GRNNLGVISL NLPRIALEAK
GDENQFWQLL DERLLIAKKA LMTRIARLEG IKARVAPILY MEGACGVRLQ ADDNIAEIFK
NGRASISLGY IGIHETINAL FGHQTHLFDD QKLREKAIAI VAHLKQATDD WKDETGYAFS
LYSTPSENLC DRFCRLDTAE FGVVEGVTDK GYYTNSFHLD VEKKVNPYDK LDFEAPYPPL
ANGGFICYGE YPNLQHNIRA LEDVWDYSYS RVPYYGTNTP IDECYECGFT GEFSCTSKGF
TCPKCGNHEP SKVSVTRRVC GYLGSPDARP FNAGKQEEVK RRVKHLANGQ LG
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