Gene YpsIP31758_3549 details

Gene Information

• Locus tag: YpsIP31758_3549
• Symbol: argF
• ID: 5386193
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 4009885
• End bp: 4010892
• Gene Length: 1008 bp
• Protein Length: 335 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640866565
• Product: ornithine carbamoyltransferase subunit I
• Protein accession: YP_001402503
• Protein GI: 153947545
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0078] Ornithine carbamoyltransferase
• TIGRFAM ID: [TIGR00658] ornithine carbamoyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAGT TCTATAAACG TCACTTTCTG AGGTTGTTAG ATTTTACCCC CGCTGAAATT 
ATTGCCTTGC TTGATTTGGC TACTGAGTTG AAAAAAGACA AGAAATCCGG CTGTGAACAG 
CAAAAATTGG TCGGTAAGAA TATCGCGCTC ATCTTCGAAA AAGACTCGAC TCGCACTCGA 
TGCTCTTTCG AAGTTGCCGC ATATGACCAA GGTGCTCGCG TCACTTATCT CGGGCCAGGG 
GGAAGCCAGA TTGGGCATAA AGAATCAATC AAGGATACCG CCCGCGTATT AGGCCGTATG 
TATGACGGCA TTCAATACCG TGGCTATGGG CAACGCGTGG TGGAAACACT CGCAGAATTT 
GCCGGCGTAC CGGTCTGGAA TGGCCTGACC AATGAGTTTC ATCCAACCCA ACTCCTGGCT 
GATTTGTTGA CGATGCGGGA ACATCTGCCC AATAAATCGC TGAATAAAAT GACGTTGGCG 
TACCTCGGTG ATACACGTAA TAACATGGGG AACAGCCTGT TAGAAGCGGC CGCACTGGTA 
GGAATGGATT TACGCCTGGT CGCACCGAAA GCCTGTTGGC CAGAAGAAGC CTTCGTTATC 
AGTTGTCAGG CACTGGCACA GAAAACGGGG GGCAAAATCA CCCTGACAGA AGATATTGCC 
GAGGGAGTGA ACGGCGCTGA TTTTCTTTAT ACCGATGTCT GGGTCTCGAT GGGGGAGCCC 
AAAGAGGTCT GGCAGGAACG CATCACCTTG CTCAAACCTT ATCAGGTCAA TATGCGTGTA 
CTGGCGCTGA CCGGTAACCC TCAGGTTAAA TTTCTGCACT GCCTCCCCGC CTTCCACGAT 
GACCAAACCA CCATCGGTAA GCAGATGGCC GAACAATATG ATTTACCCGG CGGCATGGAA 
GTGACTGAAG AGGTGTTTGA ATCAGCTCAT AGCATTGTAT TTGATCAGGC AGAAAACCGC 
CTGCATACCA TCAAAGCCGT GATGGTCGCC ACGATGAGCA AAATATAA 

 

Protein sequence

MNQFYKRHFL RLLDFTPAEI IALLDLATEL KKDKKSGCEQ QKLVGKNIAL IFEKDSTRTR 
CSFEVAAYDQ GARVTYLGPG GSQIGHKESI KDTARVLGRM YDGIQYRGYG QRVVETLAEF 
AGVPVWNGLT NEFHPTQLLA DLLTMREHLP NKSLNKMTLA YLGDTRNNMG NSLLEAAALV 
GMDLRLVAPK ACWPEEAFVI SCQALAQKTG GKITLTEDIA EGVNGADFLY TDVWVSMGEP 
KEVWQERITL LKPYQVNMRV LALTGNPQVK FLHCLPAFHD DQTTIGKQMA EQYDLPGGME 
VTEEVFESAH SIVFDQAENR LHTIKAVMVA TMSKI