Gene YpsIP31758_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3499 
Symbol 
ID5385846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3948904 
End bp3950175 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content51% 
IMG OID640866512 
ProductNupC family nucleoside transporter 
Protein accessionYP_001402454 
Protein GI153950158 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGA GTTTGGTCGG GATGGCAGTA CTGATATTAA TCGCCGTACT GCTTTCAAGT 
AATGCCAGGG CGATTAATCT TCGCACTGTC ATCGGTGCAT TTATTATCCA AGTGGTGATT
GGTGCGCTGG TGCTATATGT ACCGGTTGGC CGCCGTATTC TAGGGGGGAT GTCGGAAGGG
GTGGCTAACG TTATTGCTTA TGGTAATGAG GGGATCTCAT TTATTTTTGG CGGATTGGTT
TCCGACAAAA TGTTTGAAGT CTTTGGCAGT GGGGGTTTTG TATTCGCCTT ACGTGTATTA
CCGGTAATTG TATTCTTCTC TTCATTGATT GCGGTGTTGT ATTACCTCGG CGTCATGCAA
ATCGTTATTA AAGTATTGGG CGGTGGTTTA CAAAAACTGC TGGGCACCTC GCGGACGGAG
TCTCTTTCTG CCACAGCCAA TATTTTCGTT GGGCAGACAG AAGCGCCGTT AGTTGTTCGC
CCCTATATTG CGACCATGAC CCAGTCAGAA CTGTTTGCGG TCATGTGTGG TGGCCTGGCC
TCGGTTGCAG GCTCGGTATT GGCCGGGTAT GCGCAAATGG GCGTACCGTT GGAATATTTG
ATTGCCGCCT CCTTTATGGC AGCACCGGGC GGGTTACTGT TCGCCAAATT AATGGTGCCT
GAAACCGAGC AAACCCACGA TAAAGTTGAT GCTATCGCAC TGATCGCGGA AGAGGACCGC
CCAGCTAACG TTATTGATGC CGCAGCTTCT GGGGCAGCCT CTGGTATGCA ACTGGCGCTG
AATGTCGGGG CGATGCTATT GGCTTTTATC GCATTGATTG CATTGCTTAA TGGCATTCTG
GGGGGGATTG GCGGCTGGTT CGATTATCCG CAACTCTCGC TGGAATTGAT TCTGGGCTGG
GTGTTCTCGC CAATCGCTTA TCTGATCGGC GTGCCATGGA GCGAAGCAAT GGTGGCGGGC
TCCTTTATCG GCCAAAAGAT TATCGTTAAC GAGTTTGTGG CCTTCATGAA CTTTGGTCAG
TATTTGCAGG CGGACGAGTT AGTGAAAGCG GCGGGTTTAC AGGTGCTCTC TGAACACACC
AAAGCGATCA TCTCTTTTGC CCTGTGTGGG TTCGCCAACT TGTCTTCGGT AGCTATTCTA
CTGGGTGGGC TGGGTAGCAT GGCACCAAAT CGTCGTCATG ATATTGCGCG CTTTGGCCTG
AAAGCCGTGG CCGCAGGGAC GTTGTCGAAT TTGATGAGTG CGACGATCGC CGGCTTCTTC
CTGGCACTGT GA
 
Protein sequence
MLMSLVGMAV LILIAVLLSS NARAINLRTV IGAFIIQVVI GALVLYVPVG RRILGGMSEG 
VANVIAYGNE GISFIFGGLV SDKMFEVFGS GGFVFALRVL PVIVFFSSLI AVLYYLGVMQ
IVIKVLGGGL QKLLGTSRTE SLSATANIFV GQTEAPLVVR PYIATMTQSE LFAVMCGGLA
SVAGSVLAGY AQMGVPLEYL IAASFMAAPG GLLFAKLMVP ETEQTHDKVD AIALIAEEDR
PANVIDAAAS GAASGMQLAL NVGAMLLAFI ALIALLNGIL GGIGGWFDYP QLSLELILGW
VFSPIAYLIG VPWSEAMVAG SFIGQKIIVN EFVAFMNFGQ YLQADELVKA AGLQVLSEHT
KAIISFALCG FANLSSVAIL LGGLGSMAPN RRHDIARFGL KAVAAGTLSN LMSATIAGFF
LAL