Gene YpsIP31758_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3464 
SymbolnhaA 
ID5388403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3903598 
End bp3904782 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content47% 
IMG OID640866477 
ProductpH-dependent sodium/proton antiporter 
Protein accessionYP_001402419 
Protein GI153949836 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.17181e-09 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAATA TCATTCGTCA ATTTTTACGC CAAGAGGCCG CAGGTGGCCT GATTCTGATT 
ATTGCTGCCG CTATTGCCCT GTTGATGGCG AACAGTGCCC TACAAGGGAT TTATCAATCA
TTTCTTGATA TACCAGTCTC GATAAAAATA GCTTCGCTGG ATATCAGTAA ACCGTTATTG
CTGTGGATTA ACGATGGTCT AATGGCGGTA TTTTTCCTGG TGGTAGGGCT GGAAGTTAAA
CGTGAGTTGA TGGAAGGCTC TCTGGCGGGC CGCGATAAAG CAGTTTTTCC CGCGATTGCT
GCATTGGGGG GGATGTTAGC CCCAGCGCTG ATTTACTTAC TGTTCAATGG TGCTGATGAG
GTGACCCGCC AAGGGTGGGC GATCCCAGCA GCGACTGATA TTGCGTTTGC CTTGGGAGTG
ATGGCGCTAT TAGGTAACCG GGTACCAACC GGGCTGAAGG TCTTTTTACT GGCATTAGCC
ATTATCGATG ATCTTGGTGT CATTATTATT ATTGCGTTGT TCTATACCCA GCAGGTTTCA
TTACAATCTT TGGGTATTGC TGCGGCTGCT ATTGCTTTAC TGGCGTATAT GAACTGGCGT
GGTGTAGGGA AAACATCAGC TTATCTGCTG GTCGGCTTGG TTTTGTGGGT TTGTATTCTT
AAATCGGGTG TACATGCGAC TTTGGCTGGG GTGATTGTTG GCTTTATGAT CCCGCTGCAT
ACCCAAGACC AACGCTCTCC TTCTGAATCG CTGGAGCATG GTTTACATCC GTGGGTTGCC
TATTTAATTT TGCCATTGTT TGCTTTTGCC AATGCGGGGG TCTCTTTACA AGGCGTTTCT
CTTTCAGGGC TGACGTCACT GCTGCCGATG GGGATTGCAA CAGGTCTGTT TATCGGTAAA
CCGTTGGGAA TTTTCACTTT TAGTTGGCTC GCGGTTAAGT TAGGAATTGC TAAACTGCCC
GATGCAATAA ATTTTAAGCA AATTTTTGCA GTTTCAGTGT TGTGTGGGAT CGGCTTTACT
ATGTCGATAT TTATCGCATC ACTGGCATTT GAAGGCACAG ATATCGCTCT GACGACCTAT
TCCAAACTAG GGATATTGCT AGGCTCTACC ACAGCGGCTG TTGTGGGTTA CAGCTTACTG
CGTTTGGTTT TACCCGCTCG GCGGAAGGCT GTTAACGTAA GGTAA
 
Protein sequence
MTNIIRQFLR QEAAGGLILI IAAAIALLMA NSALQGIYQS FLDIPVSIKI ASLDISKPLL 
LWINDGLMAV FFLVVGLEVK RELMEGSLAG RDKAVFPAIA ALGGMLAPAL IYLLFNGADE
VTRQGWAIPA ATDIAFALGV MALLGNRVPT GLKVFLLALA IIDDLGVIII IALFYTQQVS
LQSLGIAAAA IALLAYMNWR GVGKTSAYLL VGLVLWVCIL KSGVHATLAG VIVGFMIPLH
TQDQRSPSES LEHGLHPWVA YLILPLFAFA NAGVSLQGVS LSGLTSLLPM GIATGLFIGK
PLGIFTFSWL AVKLGIAKLP DAINFKQIFA VSVLCGIGFT MSIFIASLAF EGTDIALTTY
SKLGILLGST TAAVVGYSLL RLVLPARRKA VNVR