| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3453 |
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| Symbol | carB |
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| ID | 5384977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3889705 |
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| End bp | 3892938 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866466 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001402408 |
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| Protein GI | 153947267 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.755127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAAAGCATC CTGATTCTGG GCGCAGGCCC GATTGTTATC
GGCCAGGCTT GTGAGTTTGA CTACTCCGGT GCCCAAGCGT GTAAAGCACT GCGCGAAGAG
GGTTACCGTG TCATTTTGGT GAACTCCAAT CCGGCGACTA TCATGACTGA CCCGGAAATG
GCCGATGCAA CTTATATCGA GCCAATTCAT TGGGAAGTGG TGCGTAAGAT TATCGAAAAA
GAGCGTCCAG ATGCTGTTTT GCCTACGATG GGTGGCCAAA CTGCACTGAA CTGTGCATTG
GAACTGGAGC GTCAGGGGGT TCTGGCAGAA TTTGGCGTCA CCATGATTGG TGCGACCGCC
GATGCCATCG ATAAAGCCGA AGACCGCCGT CGCTTTGATA TCGCGATGAA GAAGATTGGT
CTGGATACGG CCCGCTCAGG TATTGCGCAT AACATGGAAG AAGCGCTGGC TGTTGCCGCT
GATGTGGGCT TCCCGTGCAT TATCCGCCCA TCCTTTACGA TGGGGGGCAC TGGTGGCGGT
ATCGCTTATA ACCGTGAAGA GTTCGAAGAG ATCTGTGAGC GCGGTCTGGA TTTGTCACCA
ACCAAAGAGT TGTTGATTGA CGAATCGCTG ATTGGCTGGA AAGAGTACGA GATGGAAGTT
GTCCGTGATA AAAACGACAA CTGCATTATC GTTTGCTCCA TTGAAAACTT CGATGCCATG
GGGATTCACA CCGGCGACTC TATCACTGTC GCACCGGCTC AGACCCTGAC CGATAAAGAA
TACCAAATCA TGCGTAATGC CTCGATGGCG GTACTGCGTG AAATCGGGGT AGAAACCGGG
GGCTCTAACG TACAGTTCTC CGTCAACCCA AAAAATGGTC GTTTGATTGT CATTGAGATG
AACCCGCGTG TTTCTCGCTC TTCAGCACTG GCCTCTAAAG CAACCGGTTT CCCGATTGCC
AAGATTGCCG CCAAACTGGC GGTCGGTTAC ACACTGGATG AGTTGATGAA TGATATCACC
GGTGGCCGTA CTCCTGCGTC CTTTGAGCCT TCTATCGACT ATGTTGTTAC CAAGATCCCA
CGCTTTAACT TTGAAAAATT TGCGGGTGCC AACGACCGTT TGACCACGCA AATGAAGTCT
GTGGGTGAAG TCATGGCCAT TGGCCGCACG CAGCAAGAAT CACTGCAAAA AGCACTGCGC
GGGCTGGAAG TGGGCGCGAC CGGTTTTGAC CCGAAAGTGA GCCTGGATGA TCCCGAAGCA
CTGACTAAAA TTCGTCGTGA ATTGAAAGAA GCGGGTGCAG AACGTATCTG GTATATCGCT
GATGCTTTCC GTGCGGGCAT GTCGGTTGAT GGTGTGTTCA ATCTGACCAA TGTTGATCGC
TGGTTCCTGG TGCAGATTGA AGAGCTGGTT CGTCTGGAAG AGAGCGTGGC AGAACTCGGT
ATCAACGGCT TGACTGCTGA ATTTATGCGT CACTTGAAAC GTAAAGGTTT CGCCGATGCT
CGTTTGGCTA AATTGGTCGG TGCAGCAGAA AGTGAAGTCC GTAAACTGCG TTACAAATAT
GGTTTACACC CGGTTTATAA GCGTGTTGAT ACCTGCGCGG CAGAGTTCTC GACGGATACG
GCTTACATGT ACTCCACCTA CGAGGAAGAG TGCGAATCTA ACCCAACCAG CGATCGTCCG
AAAGTGATGG TGCTGGGTGG CGGCCCGAAC CGTATCGGAC AAGGTATTGA GTTCGACTAT
TGCTGCGTAC ACGCTTCATT GGCACTGCGT GAAGACGGTT ACGAAACCAT CATGGTGAAC
TGTAACCCTG AGACGGTTTC AACCGATTAT GACACCTCTG ATCGTCTCTA CTTCGAGTCA
GTCACGCTGG AAGATGTGTT GGAAATCGTC CGTATTGAGA AACCACAGGG CGTTATCGTG
CAGTACGGTG GTCAGACACC GCTGAAATTA GCCCGCGAGT TGGAAGCGGC TGGTGTCCCC
ATTATTGGGA CCAGTCCGGA TGCCATTGAC CGTGCCGAAG ACCGTGAGCG TTTCCAGCAG
GCGGTAAATC GTCTGGGCCT GAAACAGCCA GCGAATGCCA CCGTAGCGAC TATCGAGCAG
GCGGTGGAAA AAGCCACTGG TCTGGGCTAT CCACTGGTCG TACGCCCTTC TTATGTTTTG
GGTGGCCGCG CGATGGAAAT CGTTTATGAC GAGATTGACC TGCGCCGTTA CTTCCAGAAT
GCCGTCAGTG TATCGAATGA TGCGCCGGTA TTGCTTGACC GCTTCCTTGA TGATGCCGTC
GAAGTGGATG TCGATGCCAT TTGTGATGGT GAACGCGTGT TGATCGGCGG CATTATGGAA
CATATAGAGC AAGCCGGGGT TCACTCTGGT GACTCAGCCT GTTCATTGCC TGCTTACACC
CTGAGCAAAG AAATTCAGGA TGTGATGCGC CAACAAGTGG AAAAACTGGC CTTTGAACTC
TGTGTCCGCG GCCTGATGAA TGTGCAGTTT GCGGTGAAAA ACAACGAAGT TTACCTGATT
GAGGTTAACC CACGGGCGGC CCGTACTGTA CCTTTCGTGT CCAAAGCGAC CGGTATGCCA
CTGGCAAAAA TTGCCGCTCG TGTGATGGTC GGCCAATCGC TGGCTGAGCA GGGCATGCTG
GAAGAAATTA TTCCGCCTTA CTACTCAGTC AAGGAAGTGG TACTGCCGTT TAATAAATTC
CCCGGTGTTG ACCCAATTTT AGGGCCAGAA ATGCGCTCTA CCGGTGAAGT CATGGGGGTT
GGCCGTACCT TCGCTGAGGC GTTCTCTAAA GCGATGTTGG GCAGTCAATC TGGCATGAAA
AAGAGTGGCC GTGCGCTATT ATCCGTCCGT GAGGGGGATA AGCACCGGGT GGTAGACTTG
GCGGCGAAGC TGCTAAAACA AGGCTTTGAA CTGGATGCAA CCCACGGAAC GGCGGTCGTG
CTGGGCGAGG CGGGGATAAA CCCACGTTTG GTTAACAAGG TGCATGAAGG CCGTCCGCAT
ATTCAGGACC GTATTAAGAA TGGCGAGTAC ACCTATATCG TGAATACCAC AGCTGGGCGT
CAGGCGATTG AAGATTCTAA GCTGATCCGT CGCAGTGCTT TGCAATATAA AGTGCATTAC
GATACGACCT TGAACGGTGG TTTTGCTACG GCGATGGCGT TAAATGCGGA TCCAACCGAT
CAAGTGATTT CGGTGCAAGA GATGCATGCC AAGATTAAGA ATATGAAAGC GTAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLAE FGVTMIGATA
DAIDKAEDRR RFDIAMKKIG LDTARSGIAH NMEEALAVAA DVGFPCIIRP SFTMGGTGGG
IAYNREEFEE ICERGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFSVNP KNGRLIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
LTKIRRELKE AGAERIWYIA DAFRAGMSVD GVFNLTNVDR WFLVQIEELV RLEESVAELG
INGLTAEFMR HLKRKGFADA RLAKLVGAAE SEVRKLRYKY GLHPVYKRVD TCAAEFSTDT
AYMYSTYEEE CESNPTSDRP KVMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN
CNPETVSTDY DTSDRLYFES VTLEDVLEIV RIEKPQGVIV QYGGQTPLKL ARELEAAGVP
IIGTSPDAID RAEDRERFQQ AVNRLGLKQP ANATVATIEQ AVEKATGLGY PLVVRPSYVL
GGRAMEIVYD EIDLRRYFQN AVSVSNDAPV LLDRFLDDAV EVDVDAICDG ERVLIGGIME
HIEQAGVHSG DSACSLPAYT LSKEIQDVMR QQVEKLAFEL CVRGLMNVQF AVKNNEVYLI
EVNPRAARTV PFVSKATGMP LAKIAARVMV GQSLAEQGML EEIIPPYYSV KEVVLPFNKF
PGVDPILGPE MRSTGEVMGV GRTFAEAFSK AMLGSQSGMK KSGRALLSVR EGDKHRVVDL
AAKLLKQGFE LDATHGTAVV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIVNTTAGR
QAIEDSKLIR RSALQYKVHY DTTLNGGFAT AMALNADPTD QVISVQEMHA KIKNMKA
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