Gene YpsIP31758_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3436 
Symbol 
ID5387135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3872664 
End bp3873224 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content43% 
IMG OID640866449 
Producthypothetical protein 
Protein accessionYP_001402391 
Protein GI153948157 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.00868528 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAG ATGCGAGCTC GCAAAAATTT ATCGGTAGAA ATAATGCACC TAGAGTGCAA 
ATTGAATATG ACGTCGAAAT TTATGGTTCA AATAAGAAAG TAGAGTTGCC TTTTGTAACC
GGCGTGATGG CTGATCTTTC TGGCCACAGG GCAAAGCCTC TTCCCGCCGT TGAAGATCGT
AAATTCCTTA CTTTCGATCA GGATAATTTC GATGCCCGGA TGAGAGCAAT TAAGCCTCGC
CTTAAATTCT ACGTAGATAA CACCTTGAGT GAGGATAACG AACTCCTGGA TATCGAACTG
GATTTTGAGT CAATGGATGA CTTTTCTCCC GGATCGTTAG CGCGGCGTAT TCCTCAAATG
GAAAAACTGC TTGAGGCACG TACCCATCTG GCTGAATTGA TCACCTATAT GGATGGTAAA
ACCAGCGCAG AAGAGGTGGT TAAACAACTG CTTGAACAAC CTGATTTTTT ACAAAATCTT
GCGACCGATG CACAGGGAAC TATTTCGAAG CTCAGCCAGG ATGATGATGT TTTAGTGGAA
GATGACGATG GAGAAAAATA G
 
Protein sequence
MAKDASSQKF IGRNNAPRVQ IEYDVEIYGS NKKVELPFVT GVMADLSGHR AKPLPAVEDR 
KFLTFDQDNF DARMRAIKPR LKFYVDNTLS EDNELLDIEL DFESMDDFSP GSLARRIPQM
EKLLEARTHL AELITYMDGK TSAEEVVKQL LEQPDFLQNL ATDAQGTISK LSQDDDVLVE
DDDGEK