| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3430 |
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| Symbol | |
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| ID | 5385669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3864496 |
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| End bp | 3867099 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640866443 |
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| Product | AAA family ATPase |
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| Protein accession | YP_001402385 |
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| Protein GI | 153949405 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGCGA TAACGGTGTA TCAACGCGAA CGTCTTTTTA ATCGATTGGG CACTTTTGCC
TATAAAACTT TTGTTGAAGC CACCCGTCTT TGCCGCAGTT ATCGGCATGA GTATGTGGAG
CTTGAACATT GGTTAAAAAT TCTCATGGAT CAACAGCGTG GGGATATTCC TGCTCTACTG
ACGCATTACG GACTGAGCCA AACGGTTATC TCCACGCAAT TGGATCGCAT TATTCAGCAT
ATGCCCGTCA CCAAAGCATC GGTGCAGGAT TTATCATCAC GCTTGGAGTC CGTGGTCGAA
GGCGGATTGG TGTTGAGCCA ATTGATGGCG TCACCTTCTC CTATCCGTAC CTCGCATATT
TTACTGGCAC TATTACAGGA TACCCAGCAT CAGCGCTGGT TATACCGCCT GTGCGATGAA
TTCAAAAAGC TGCCGGTCCC ACAGGTTGCA GAGGAATATG AAGGCCTATT AGTTAACTCC
ATTGAACAGA CCAGCGAGGT TCAAAGAGGC GACGCATTAG TGACGGAAAC GGACAGCAGC
TCATCAAAAG AAGCGCATGC GGCATTGAAC AAATGGTGTA ACGACCTTAC CCAGCAAGCC
CGTGACGGTG AGATTGACCC CGTTATTGGT CGTGAAGCAG AACTGCGTCA AGTGATTGAT
ATTTTACTCC GTCGCCGTCA GAACAACCCT ATTTTGGTTG GGGAAGCGGG GGTCGGTAAA
ACGGCGGTGG TTGAAGCGCT AGCGCGAAAA CTGGCCAGTG GCGATGTCCC TCCGCTGTTG
CAAGGGGCGC GTCTGCTTTC TCTGGATTTG GGGAGGATGC AAGCCGGTGC CAGTATGCGC
GGTGAATTTG AATCACGTCT TAAATCCCTG ATCGATGGCA TCAGCCAATC GGATACCCCG
GTTATTCTGT TTTGTGATGA AGCCCATACG TTGGTGGGGG CAGGCGGGCA GGCGGGCACG
GGGGATGCGG TCAACCTGCT TAAACCGATG TTGGCGAGGG GCGCATTGCG CATGATCGCC
GCCACCACCT GGTCAGAGTA TAAACAGTTT ATTGAACCTG ACGCCGCGCT GACCCGGCGT
TTCCAGCGGG TATTGATTGG CGAGCCAAAC GAATCTACCG CCGTCGATAT GCTACGGGCG
ATTGCGCCAC ATTTTGCTCA ACATCATAAC GTCACTATCC GCGACGGTGC CATTCACGCG
GCGGTGCGCC TGTCATTACG CAACCTGCCT TCCCGGCAGT TGCCCGATAA AGCCATCAGT
CTGCTCGACA CCGCTTGCGC GCGGGTCGCG CTCAGCCAAT ATGCCCAACC ACAGGCGATT
GAACAGTTAT CGGCCCAACT GGATGTGCTC AAAACCGAGC ATCAATATCT GGTACGGGAG
AAGCAACTGG GCGAAGCGGT TGATCAACGG CTAGATGACG TTCAGACACA GATCCAGGCG
TTTGAACATG AACTAACCGC CTTGCAAAGC CGCCATCTGC ATGAGCAACA GCTAGTGAGG
GAGGTCCTGC CGGAGGGAGA AGGCAGTGGC ATGATGACGG AAAATGCCCG CTGGGGTGAA
CTGATGGCGT TACAGGAAGC GTCGCCACTG GTCTATCCAT GGGTTGATGA GCAGAGCATC
GCCGCGGTGC TTTCCGATTG GACCGGGATC CCGTCCGGCA AAATGTTGCA GGACGATATT
GAATGCGTCC TGAATCTTGA ACAGCGTCTC GGTGATCATA TTTTCGGGCA ACGCAACGCT
ATCAAAGAGA TTTCGCAGGC GATACGTATT GCTCGGGCGG GCATCCAGTC TCAGGAGCGG
CCACTCGGGA TCTTCCTGCT GGCGGGGTCA ACCGGTACGG GCAAAACAGA AACGGCCAAT
GTACTGGTCG AAACCTTGTA TGGCGGTGCT CATAACCTTA TTACCTTCAA TATGAGTGAG
TTCCAAGAGG CGCATACCTT ATCCACACTG AAAGGCGCAC CTCCGGGCTA TGTCGGCTAT
GGCAAGGGGG GGAAATTAAC CGAAGCGGTA AGACGCAAAC CTTATTCGGT CATCCTGCTT
GATGAGTTTG ATAAAGCTCA CGCCGATATT CAGGACGCCT TTTATCAGGT CTTCGACAAA
GGGTGGATGG AAGATGCCGA AGGGCGTCGG GTCAGTTTCC GCCAGTGTTT CATCTTACTG
ACCTGTAATC AGGGCGCGGA AGAGATCGAA CAGGCTTACC TCACCGCCAA CGATATCAAA
CCCGGTGCAT TAAAACCGTT GGTATACGAC GCCCTGTTGC GCCGCTTTGC GCCAGCGCTG
TTAGCCAGGG TCAATATCAT TCCTTATATC CCATTAGATC AGGACGCTCT GGCACAGATC
GCCTCTCATC ATCTTGCGCG CTTACAAACG CGCCTGTGGG ATGAAATTGG TGCCACTTTG
GTGACCGAGG GGGATATCCC CGGCTGGATC GCCTCACGGG TTTGCAGCCA TCCGAACCAT
GGTCGTGCGG TGGAAGAACT CTTGCGTCAA ACCTTACTTC CCGCTGTTGG CAATGAAGTG
TTGAAGCGTC GCCATGAGGC TGAACCGCTG AGAGAGATAC GCCTGATTGT TGAGGAGACA
GAACTGAGTA TTGAGTTCGC GTAG
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| Protein sequence | MGAITVYQRE RLFNRLGTFA YKTFVEATRL CRSYRHEYVE LEHWLKILMD QQRGDIPALL
THYGLSQTVI STQLDRIIQH MPVTKASVQD LSSRLESVVE GGLVLSQLMA SPSPIRTSHI
LLALLQDTQH QRWLYRLCDE FKKLPVPQVA EEYEGLLVNS IEQTSEVQRG DALVTETDSS
SSKEAHAALN KWCNDLTQQA RDGEIDPVIG REAELRQVID ILLRRRQNNP ILVGEAGVGK
TAVVEALARK LASGDVPPLL QGARLLSLDL GRMQAGASMR GEFESRLKSL IDGISQSDTP
VILFCDEAHT LVGAGGQAGT GDAVNLLKPM LARGALRMIA ATTWSEYKQF IEPDAALTRR
FQRVLIGEPN ESTAVDMLRA IAPHFAQHHN VTIRDGAIHA AVRLSLRNLP SRQLPDKAIS
LLDTACARVA LSQYAQPQAI EQLSAQLDVL KTEHQYLVRE KQLGEAVDQR LDDVQTQIQA
FEHELTALQS RHLHEQQLVR EVLPEGEGSG MMTENARWGE LMALQEASPL VYPWVDEQSI
AAVLSDWTGI PSGKMLQDDI ECVLNLEQRL GDHIFGQRNA IKEISQAIRI ARAGIQSQER
PLGIFLLAGS TGTGKTETAN VLVETLYGGA HNLITFNMSE FQEAHTLSTL KGAPPGYVGY
GKGGKLTEAV RRKPYSVILL DEFDKAHADI QDAFYQVFDK GWMEDAEGRR VSFRQCFILL
TCNQGAEEIE QAYLTANDIK PGALKPLVYD ALLRRFAPAL LARVNIIPYI PLDQDALAQI
ASHHLARLQT RLWDEIGATL VTEGDIPGWI ASRVCSHPNH GRAVEELLRQ TLLPAVGNEV
LKRRHEAEPL REIRLIVEET ELSIEFA
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