Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3430 |
Symbol | |
ID | 5385669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3864496 |
End bp | 3867099 |
Gene Length | 2604 bp |
Protein Length | 867 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640866443 |
Product | AAA family ATPase |
Protein accession | YP_001402385 |
Protein GI | 153949405 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGCGA TAACGGTGTA TCAACGCGAA CGTCTTTTTA ATCGATTGGG CACTTTTGCC TATAAAACTT TTGTTGAAGC CACCCGTCTT TGCCGCAGTT ATCGGCATGA GTATGTGGAG CTTGAACATT GGTTAAAAAT TCTCATGGAT CAACAGCGTG GGGATATTCC TGCTCTACTG ACGCATTACG GACTGAGCCA AACGGTTATC TCCACGCAAT TGGATCGCAT TATTCAGCAT ATGCCCGTCA CCAAAGCATC GGTGCAGGAT TTATCATCAC GCTTGGAGTC CGTGGTCGAA GGCGGATTGG TGTTGAGCCA ATTGATGGCG TCACCTTCTC CTATCCGTAC CTCGCATATT TTACTGGCAC TATTACAGGA TACCCAGCAT CAGCGCTGGT TATACCGCCT GTGCGATGAA TTCAAAAAGC TGCCGGTCCC ACAGGTTGCA GAGGAATATG AAGGCCTATT AGTTAACTCC ATTGAACAGA CCAGCGAGGT TCAAAGAGGC GACGCATTAG TGACGGAAAC GGACAGCAGC TCATCAAAAG AAGCGCATGC GGCATTGAAC AAATGGTGTA ACGACCTTAC CCAGCAAGCC CGTGACGGTG AGATTGACCC CGTTATTGGT CGTGAAGCAG AACTGCGTCA AGTGATTGAT ATTTTACTCC GTCGCCGTCA GAACAACCCT ATTTTGGTTG GGGAAGCGGG GGTCGGTAAA ACGGCGGTGG TTGAAGCGCT AGCGCGAAAA CTGGCCAGTG GCGATGTCCC TCCGCTGTTG CAAGGGGCGC GTCTGCTTTC TCTGGATTTG GGGAGGATGC AAGCCGGTGC CAGTATGCGC GGTGAATTTG AATCACGTCT TAAATCCCTG ATCGATGGCA TCAGCCAATC GGATACCCCG GTTATTCTGT TTTGTGATGA AGCCCATACG TTGGTGGGGG CAGGCGGGCA GGCGGGCACG GGGGATGCGG TCAACCTGCT TAAACCGATG TTGGCGAGGG GCGCATTGCG CATGATCGCC GCCACCACCT GGTCAGAGTA TAAACAGTTT ATTGAACCTG ACGCCGCGCT GACCCGGCGT TTCCAGCGGG TATTGATTGG CGAGCCAAAC GAATCTACCG CCGTCGATAT GCTACGGGCG ATTGCGCCAC ATTTTGCTCA ACATCATAAC GTCACTATCC GCGACGGTGC CATTCACGCG GCGGTGCGCC TGTCATTACG CAACCTGCCT TCCCGGCAGT TGCCCGATAA AGCCATCAGT CTGCTCGACA CCGCTTGCGC GCGGGTCGCG CTCAGCCAAT ATGCCCAACC ACAGGCGATT GAACAGTTAT CGGCCCAACT GGATGTGCTC AAAACCGAGC ATCAATATCT GGTACGGGAG AAGCAACTGG GCGAAGCGGT TGATCAACGG CTAGATGACG TTCAGACACA GATCCAGGCG TTTGAACATG AACTAACCGC CTTGCAAAGC CGCCATCTGC ATGAGCAACA GCTAGTGAGG GAGGTCCTGC CGGAGGGAGA AGGCAGTGGC ATGATGACGG AAAATGCCCG CTGGGGTGAA CTGATGGCGT TACAGGAAGC GTCGCCACTG GTCTATCCAT GGGTTGATGA GCAGAGCATC GCCGCGGTGC TTTCCGATTG GACCGGGATC CCGTCCGGCA AAATGTTGCA GGACGATATT GAATGCGTCC TGAATCTTGA ACAGCGTCTC GGTGATCATA TTTTCGGGCA ACGCAACGCT ATCAAAGAGA TTTCGCAGGC GATACGTATT GCTCGGGCGG GCATCCAGTC TCAGGAGCGG CCACTCGGGA TCTTCCTGCT GGCGGGGTCA ACCGGTACGG GCAAAACAGA AACGGCCAAT GTACTGGTCG AAACCTTGTA TGGCGGTGCT CATAACCTTA TTACCTTCAA TATGAGTGAG TTCCAAGAGG CGCATACCTT ATCCACACTG AAAGGCGCAC CTCCGGGCTA TGTCGGCTAT GGCAAGGGGG GGAAATTAAC CGAAGCGGTA AGACGCAAAC CTTATTCGGT CATCCTGCTT GATGAGTTTG ATAAAGCTCA CGCCGATATT CAGGACGCCT TTTATCAGGT CTTCGACAAA GGGTGGATGG AAGATGCCGA AGGGCGTCGG GTCAGTTTCC GCCAGTGTTT CATCTTACTG ACCTGTAATC AGGGCGCGGA AGAGATCGAA CAGGCTTACC TCACCGCCAA CGATATCAAA CCCGGTGCAT TAAAACCGTT GGTATACGAC GCCCTGTTGC GCCGCTTTGC GCCAGCGCTG TTAGCCAGGG TCAATATCAT TCCTTATATC CCATTAGATC AGGACGCTCT GGCACAGATC GCCTCTCATC ATCTTGCGCG CTTACAAACG CGCCTGTGGG ATGAAATTGG TGCCACTTTG GTGACCGAGG GGGATATCCC CGGCTGGATC GCCTCACGGG TTTGCAGCCA TCCGAACCAT GGTCGTGCGG TGGAAGAACT CTTGCGTCAA ACCTTACTTC CCGCTGTTGG CAATGAAGTG TTGAAGCGTC GCCATGAGGC TGAACCGCTG AGAGAGATAC GCCTGATTGT TGAGGAGACA GAACTGAGTA TTGAGTTCGC GTAG
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Protein sequence | MGAITVYQRE RLFNRLGTFA YKTFVEATRL CRSYRHEYVE LEHWLKILMD QQRGDIPALL THYGLSQTVI STQLDRIIQH MPVTKASVQD LSSRLESVVE GGLVLSQLMA SPSPIRTSHI LLALLQDTQH QRWLYRLCDE FKKLPVPQVA EEYEGLLVNS IEQTSEVQRG DALVTETDSS SSKEAHAALN KWCNDLTQQA RDGEIDPVIG REAELRQVID ILLRRRQNNP ILVGEAGVGK TAVVEALARK LASGDVPPLL QGARLLSLDL GRMQAGASMR GEFESRLKSL IDGISQSDTP VILFCDEAHT LVGAGGQAGT GDAVNLLKPM LARGALRMIA ATTWSEYKQF IEPDAALTRR FQRVLIGEPN ESTAVDMLRA IAPHFAQHHN VTIRDGAIHA AVRLSLRNLP SRQLPDKAIS LLDTACARVA LSQYAQPQAI EQLSAQLDVL KTEHQYLVRE KQLGEAVDQR LDDVQTQIQA FEHELTALQS RHLHEQQLVR EVLPEGEGSG MMTENARWGE LMALQEASPL VYPWVDEQSI AAVLSDWTGI PSGKMLQDDI ECVLNLEQRL GDHIFGQRNA IKEISQAIRI ARAGIQSQER PLGIFLLAGS TGTGKTETAN VLVETLYGGA HNLITFNMSE FQEAHTLSTL KGAPPGYVGY GKGGKLTEAV RRKPYSVILL DEFDKAHADI QDAFYQVFDK GWMEDAEGRR VSFRQCFILL TCNQGAEEIE QAYLTANDIK PGALKPLVYD ALLRRFAPAL LARVNIIPYI PLDQDALAQI ASHHLARLQT RLWDEIGATL VTEGDIPGWI ASRVCSHPNH GRAVEELLRQ TLLPAVGNEV LKRRHEAEPL REIRLIVEET ELSIEFA
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