Gene YpsIP31758_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3417 
Symbol 
ID5388454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3843303 
End bp3844070 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content51% 
IMG OID640866430 
Producthypothetical protein 
Protein accessionYP_001402372 
Protein GI153948505 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCT ATTTATTACA TTTATTGACG CAATCCCTGG CTTTCACGCT ATTTATCGTC 
ATGTTAGTCA CTTTTCTCGA ATCTTTAGCG CTGGTGGGCA TGTTATTACC GGGAACGGTG
ATGATGACCA GCGTGGGCGC GCTGATTGGC AGTGGCGAAG TGGATTTTTA TTTCGCCTGG
GTTGCCGCGA CCCTCGGTTG CCTGTTAGGG GATTGGATAT CGTATTTCAT TGGCCGCCGT
TTCAAAGCGC CGCTACACAA TTGGTCTTTC CTACAAAAAC ATAAATCGTT GCTGAATAAA
ACTGAGCATG CATTGCATAA CCACAGCATG GCAACGGTAC TCTTGGGGCG TTTTATTGGC
CCGACACGGC CCATCGTACC CATGGTGGCT GGGATGCTGA ACTTGCCAAC GGCAAAGTTT
GCCTTACCCA GTGTGATTGG TGGCCTGACA TGGCCGCCGA TTTATCTCTT CCCCGGTATA
TTGGCAGGGG TTGCCATCGA TATCCCGCCG AGCAGTAATA GCTTTATGTT TAAGTGCCTA
CTGTTTGTGG TGGTGGTACT GATTTGGCTG TCGTTGTGGT TATCATGGCG CTGGTGGCGT
TTTGGTAAGC GCAGCCCAGA TCGCCTGAGT GTGTGGCTCC CCTTGGCCCG CTTGCGTTGG
GTGACGCTGT TAACTATTGC GGCCGCTATC GCCAGTTTTA TCTGGCTACA TATGCAACCA
CTGATGCCAA TCTATCGCCA TCTGTTGTGG AAAGTCTTGG CTGGGTAA
 
Protein sequence
MEAYLLHLLT QSLAFTLFIV MLVTFLESLA LVGMLLPGTV MMTSVGALIG SGEVDFYFAW 
VAATLGCLLG DWISYFIGRR FKAPLHNWSF LQKHKSLLNK TEHALHNHSM ATVLLGRFIG
PTRPIVPMVA GMLNLPTAKF ALPSVIGGLT WPPIYLFPGI LAGVAIDIPP SSNSFMFKCL
LFVVVVLIWL SLWLSWRWWR FGKRSPDRLS VWLPLARLRW VTLLTIAAAI ASFIWLHMQP
LMPIYRHLLW KVLAG