Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3416 |
Symbol | thiQ |
ID | 5385695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3842524 |
End bp | 3843234 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640866429 |
Product | thiamine transporter ATP-binding subunit |
Protein accession | YP_001402371 |
Protein GI | 153948164 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAAGC TTGAGAAAAT CACCTATTTG TATGACCACT TACCCATGTG TTTTGATCTG CGCATTCAAC CCGGTGAGCG GGTGGCGATC CTTGGCCCAA GCGGCGCAGG TAAAAGTACT CTGCTGAGCT TGATTGCCGG GTTTCTCGCC CCGACCAGTG GTCACATGCT GCTGAATAAT CAAGACCATA CGGCCAGCAC CCCCGCCCAA AGGCCGGTCT CGATGCTGTT TCAGGAGAAT AACCTGTTTG CACATCTCAC CGTCGAACAG AACATCGGGC TAGGTTTACA TCCGGGGTTG AAGCTCAGTG GTGAACAGCG CTTACTGTTA CAACACATCG CCCAGCAAGT TGGATTGGAA AGCTGCCTCG ACCGGCTGCC CGCACAACTC TCGGGGGGGC AACGCCAACG GGCGGCATTG GCCCGCTGCT TGGTGCGTAG CCAACCTATT TTGTTACTGG ATGAACCGTT TTCAGCGCTG GATCCGGCGC TGCGTAATGA AATGCTGCAA TTAGTTGATC AGGTGTGCAT AAACCGCCAA CTGACGTTGC TGATGGTGTC GCACAATTTA GATGATGCCG CACGTATTGC CCAGCGCACG TTGTTGATTG TTGAGGGCCG TATTGACTAC GATGGCCCCA CACAGGCCTT GGTGGACGGC AGTGCGGCAA AAGCCAGCGT ACTGGGTATC AAAAGTGCCG TTATATCTTG A
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Protein sequence | MLKLEKITYL YDHLPMCFDL RIQPGERVAI LGPSGAGKST LLSLIAGFLA PTSGHMLLNN QDHTASTPAQ RPVSMLFQEN NLFAHLTVEQ NIGLGLHPGL KLSGEQRLLL QHIAQQVGLE SCLDRLPAQL SGGQRQRAAL ARCLVRSQPI LLLDEPFSAL DPALRNEMLQ LVDQVCINRQ LTLLMVSHNL DDAARIAQRT LLIVEGRIDY DGPTQALVDG SAAKASVLGI KSAVIS
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