| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3386 |
|---|
| Symbol | murC |
|---|
| ID | 5388122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3806043 |
|---|
| End bp | 3807545 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640866401 |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_001402343 |
|---|
| Protein GI | 153949929 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.643221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA AAAAAGTGAA GAGAAACGTG AATACACAAC AACTGGCGAA ACTGCGTACT
ATCGTGCCCG AGATGCGACG TGTCCGGCAC ATTCACTTTG TTGGCATCGG TGGTGCCGGC
ATGGGGGGTA TCGCCGAAGT GTTGGCCAAC GAAGGTTATC AGATTAGTGG TTCAGATTTA
GCACCCAACT CGGTAACTCA GCATTTGACT GCCCTGGGTG CACAGATTTA TTTCCATCAT
CGCCCGGAAA ACGTGCTGGA TGCGAGCGTG GTCGTGGTTT CTACTGCAAT CTCTGCGGAT
AACCCAGAGA TTGTCGCGGC CCGTGAGGCG AGAATACCGG TGATCCGCCG CGCAGAAATG
TTGGCGGAAT TGATGCGCTA CCGTCATGGA ATTGCCGTTG CTGGCACCCA CGGCAAAACC
ACCACAACGG CGATGTTATC CAGTATTTAT GCCGAAGCAG GGTTAGATCC AACGTTCGTC
AATGGTGGGT TAGTCAAGGC CGCGGGTACA CATGCTCGTT TGGGTTCCAG CCGTTACCTG
ATTGCAGAAG CCGATGAAAG CGACGCGTCA TTCCTGCATT TGCAACCGAT GGTGGCGATT
GTTACCAATA TCGAAGCCGA TCATATGGAT ACCTACCAAG GCGACTTCGA AAATTTAAAA
CAGACATTCA TTAACTTTTT GCACAATTTG CCCTTTTATG GCCGTGCGGT GATGTGTATC
GATGATCCCG TAGTGCGTGA ATTATTGCCA CGTGTTGGCC GTCACATCAC AACCTATGGT
TTCAGTGATG ATGCTGATGT GCAGATCGCC AGCTATCGGC AAGAAGGCCC ACAAGGGCAC
TTCACGTTGC GCCGTCAGGA TAAACCGTTG ATAGAGGTGA CCTTGAATGC ACCAGGTCGC
CACAATGCAC TGAATGCGGC GGCAGCAGTC GCTGTCGCAA CAGAAGAAGG CATTGAAGAC
GAAGATATCC TGCGTGCATT AGTGGGTTTC CAAGGGACGG GGCGCCGTTT TGATTTCCTC
GGCAACTTCC CACTGGCCCC GGTTAACGGT AAAGAAGGCA GTGCGATGCT GGTTGATGAT
TATGGTCATC ACCCTACCGA AGTGGATGCC ACTATTAAAG CCGCACGTGC TGGTTGGCCG
GATAAACGCA TTGTCATGCT CTTTCAGCCA CACCGCTATA CCCGAACCCG CGATCTGTAT
GACGATTTCG CGAATGTGTT GTCACAGGTC GATGTTTTAT TGATGCTGGA TGTGTATGCC
GCAGGTGAGC CACCGATCCC AGGGGCAGAT AGCCGCGCGT TGTGCCGAAC GATTCGTAAT
CGCGGTAAGT TGGACCCTAT TTTAGTGCCA GACAGCGAAT CAGCACCTGA AATGTTGGCG
CAAATACTGA ACGGGGAAGA CCTGATCTTG GTTCAGGGCG CAGGTAACAT TGGTAAAATT
GCCCGTAAAT TGGCTGAGCA TAAATTGCAG CCACAGTTAA AAGACGAGGA ACATCATGGC
TGA
|
|---|
| Protein sequence | MTDKKVKRNV NTQQLAKLRT IVPEMRRVRH IHFVGIGGAG MGGIAEVLAN EGYQISGSDL
APNSVTQHLT ALGAQIYFHH RPENVLDASV VVVSTAISAD NPEIVAAREA RIPVIRRAEM
LAELMRYRHG IAVAGTHGKT TTTAMLSSIY AEAGLDPTFV NGGLVKAAGT HARLGSSRYL
IAEADESDAS FLHLQPMVAI VTNIEADHMD TYQGDFENLK QTFINFLHNL PFYGRAVMCI
DDPVVRELLP RVGRHITTYG FSDDADVQIA SYRQEGPQGH FTLRRQDKPL IEVTLNAPGR
HNALNAAAAV AVATEEGIED EDILRALVGF QGTGRRFDFL GNFPLAPVNG KEGSAMLVDD
YGHHPTEVDA TIKAARAGWP DKRIVMLFQP HRYTRTRDLY DDFANVLSQV DVLLMLDVYA
AGEPPIPGAD SRALCRTIRN RGKLDPILVP DSESAPEMLA QILNGEDLIL VQGAGNIGKI
ARKLAEHKLQ PQLKDEEHHG
|
|---|
| |